AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00606 ATGGAGGTCATCTCAAAACATCACGACAGAGAAAATCAATCTCCGGCGAACTCTCCGTCCAGTCACGGAAGCAGTAGCAACAGCGTCGGAGCTGCCGCCGCCGCCGCCGCACAAACACCTCCACTAACTCCAAGACCCGTTTCAAGATCCGAACCAAATCCATACCCAACAACGTTCGTCCAAGCCGACACAAATTCCTTCAAACAAGTAGTCCAGATGCTAACCGGGTCATCCAAATCGACCCAACAAGATCCAGCTCCGTCTAAAATATCCATCCCGCCGATCAAAACCGGCCAGCAGAAAAAACAGGGGTTTAAGCTTTACGAGCGTCGGAACAGCCTGAAAAACGGGCTGATGATTAACCCGTTGGCGCCGAAGTCCGGCCACGGTCATGGGTTTTCTCCGAGAGTCCATGAAATGCTTTCTCCGAGCATTCTTGATTTTCCGGCGCTTGTTCTTAGTCCGGTGACGCCATTGATAGAAGATCCGTTTTACAAATCGTCACCGTCGACGTTAGGGAATTCGTCAGAAGAAGAGAGAGCGATTGCGGAAAAAGGGTTTTATTTGCATCCGTCGCCTAGGGCGGCGACGCCACATGGGACGGCGGAGCCACAGCTGTTGCCGCTTTTTCCGTTGACGTCGCCGCGGGTATCAAAGTCGTCGATTTAG 669 52.47 MEVISKHHDRENQSPANSPSSHGSSSNSVGAAAAAAAQTPPLTPRPVSRSEPNPYPTTFVQADTNSFKQVVQMLTGSSKSTQQDPAPSKISIPPIKTGQQKKQGFKLYERRNSLKNGLMINPLAPKSGHGHGFSPRVHEMLSPSILDFPALVLSPVTPLIEDPFYKSSPSTLGNSSEEERAIAEKGFYLHPSPRAATPHGTAEPQLLPLFPLTSPRVSKSSI 222
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00606 222 MobiDBLite consensus disorder prediction 1 103 - -
Pdy4g00606 222 MobiDBLite consensus disorder prediction 164 185 - -
Pdy4g00606 222 MobiDBLite consensus disorder prediction 14 33 - -
Pdy4g00606 222 MobiDBLite consensus disorder prediction 52 98 - -
Pdy4g00606 222 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 24 218 IPR039611 -
Pdy4g00606 222 Pfam VQ motif 54 78 IPR008889 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00606 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
132701 Pdy4g00606 Pdy9g01944
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pdy Pdy-Chr4:11219635 Pdy5g00243 Pdy-Chr5:3457830 dispersed
Pdy Pdy-Chr4:11219635 Pdy4g04357 Pdy-Chr4:95523752 wgd
Pdy Pdy-Chr4:11219635 Pdy9g01944 Pdy-Chr9:42931866 wgd