AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00618 ATGACTGGAGTGTCATTGGATTTAAGAACACAGAGTTATGGATCACCGCAGCAGCCGCAGAATGGTTCATTGCAGACTCAAAACGGATTCAGTGTGCGCAAGACTTCAAGGATGTCATTGTCTGGTTCGAGGGAGAAGGATAAATTTCTTCCCTTTTTGTGTAGATATTTAAGTAGAAAGAAGGTTGTAATGATGATTTTAGTATCATTTGCTCTCATGGCTTTCTTGTCAGGCTTCTTTACCGTCAATAGAGAAGATGCATCAGATAGCACGATCTTGAGTCATTTTAACGAGGCTTATAATACCTCTTTACAGTTCTCCAGAAAGTTCGGTAGTCAGAAAGACGATAATTCTTCTATTCAGACAGCTCTATCTGTATGTGAAGAAAATCCACCTTATCGCCACTTTTCAGGCTCATCAATATCTACAGGATCCATCAATTCTCATAGCAATCTATGTCAGAATTTTGCATTTCCTCCTCCTCCTCCAGGTGATAGGAGACGGCCTGGACCCAGACCTTGTCCTGTATGTTACCTTCCTGTGGAGGAGGCTATGGGTAGCATGCCAAGCTCCCCCTCAGCATCACCTGTGGTTCAACACTTAACTTATTTTCATGAAGAAACTTCTACTAAAACAGAACCACATGAAGGCTCAGACTTTGGTGGGTATCCTTCCATAAAACAGAGAAATGAATCTTTTGATATAAAAGAATCAATGACTGTGCATTGTGGATTTGTAAAAGGATGCAGACCTGGTTACCAAACTGGCTTCGATATCGATGTATCTGATCTTGTGGAGTTGGAGCAGTTTCATGATATTATTGTTGCATCAGCCATATTTGGAAACTATGATGTGATTCAACAGCCAACTAAGATTAGCGAGGCTGCTAGTAGAAACATCCCGTTTTATATGTTTATTGATGAAGAGACAGAAGCATATATGAGAAATTCTAGTGCTTTGGACTACAGAATGAAGGTTGGATTGTGGAGAATTATTGTTGTGCATAATGTTCCCTACGCTGATTCTAGACGTAATGGAAAGGTGCCAAAGCTTCTACTACACAGACTCTTTCCAAATGTTCGGTATTCTGTATGGATTGACGGGAAGCTACAACTCGTGGTGGATCCGTATCAACTTCTTGAGAGATTCTTGTGGCGCAATAATGCCACTTTTGCAATTTCAAAACATTATAGGCGGTTTGATGTGTTTGAAGAAGCTGAGGCTAACAAGGCTGCAGGGAAATATGACAATGCATCCATTGATTACCAGATTGACTTTTATAGAAAAGAGGGTTTAACACCTTATTCTGAGGCTAAGCTTCCTATAACCAGTGATGTCCCGGAAGGGTGTGTTATCATAAGAGAACACATTCCGATAACAAATCTCTTCACGTGTTTGTGGTTCAATGAAGTTGACCGGTTTACTTCAAGAGATCAGTTGAGCTTTGCTACTGTAAGGGACAAAATCATGGCTCAGGTTAACTGGAGCATCAACATGTTCATGGATTGTGAAAGGCGTAACTTCGTGATACAGGCATACCACCGAGATCTACTAGAGCACATGCCGCCTCCTGCAGTTATAACAAGTAACTCAAAGCGTGCCCGAGTTAATGTTCCTGTTCCGGTTTCTGTTTTGGGTCGGGGTAGCTCACCTGCTAAGAACTCGGCAAAGAAAACCCCTGTTAAACGTGGGAAAGGGGAGAGGAGATCTCGTGCTAGGAGACACCCGAAATATTCGAGTAACAGGGACAACACGATCTTTTGA 1764 41.84 MTGVSLDLRTQSYGSPQQPQNGSLQTQNGFSVRKTSRMSLSGSREKDKFLPFLCRYLSRKKVVMMILVSFALMAFLSGFFTVNREDASDSTILSHFNEAYNTSLQFSRKFGSQKDDNSSIQTALSVCEENPPYRHFSGSSISTGSINSHSNLCQNFAFPPPPPGDRRRPGPRPCPVCYLPVEEAMGSMPSSPSASPVVQHLTYFHEETSTKTEPHEGSDFGGYPSIKQRNESFDIKESMTVHCGFVKGCRPGYQTGFDIDVSDLVELEQFHDIIVASAIFGNYDVIQQPTKISEAASRNIPFYMFIDEETEAYMRNSSALDYRMKVGLWRIIVVHNVPYADSRRNGKVPKLLLHRLFPNVRYSVWIDGKLQLVVDPYQLLERFLWRNNATFAISKHYRRFDVFEEAEANKAAGKYDNASIDYQIDFYRKEGLTPYSEAKLPITSDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQLSFATVRDKIMAQVNWSINMFMDCERRNFVIQAYHRDLLEHMPPPAVITSNSKRARVNVPVPVSVLGRGSSPAKNSAKKTPVKRGKGERRSRARRHPKYSSNRDNTIF 587
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00618 587 MobiDBLite consensus disorder prediction 543 587 - -
Pdy4g00618 587 MobiDBLite consensus disorder prediction 1 39 - -
Pdy4g00618 587 Pfam TOD1-MUCI70, glycosyltransferase-like domain 201 514 IPR048354 -
Pdy4g00618 587 PANTHER ALKALINE CERAMIDASE-RELATED 34 547 IPR006852 -
Pdy4g00618 587 MobiDBLite consensus disorder prediction 1 38 - -
Pdy4g00618 587 MobiDBLite consensus disorder prediction 558 576 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00618 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pdy Pdy-Chr2:33687575 Pdy4g00618 Pdy-Chr4:11345885 dispersed
Pdy Pdy-Chr4:11345885 Pdy7g01056 Pdy-Chr7:45673967 dispersed
Pdy Pdy-Chr4:11345885 Pdy4g04362 Pdy-Chr4:95600051 wgd