Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pdy4g00618 | ATGACTGGAGTGTCATTGGATTTAAGAACACAGAGTTATGGATCACCGCAGCAGCCGCAGAATGGTTCATTGCAGACTCAAAACGGATTCAGTGTGCGCAAGACTTCAAGGATGTCATTGTCTGGTTCGAGGGAGAAGGATAAATTTCTTCCCTTTTTGTGTAGATATTTAAGTAGAAAGAAGGTTGTAATGATGATTTTAGTATCATTTGCTCTCATGGCTTTCTTGTCAGGCTTCTTTACCGTCAATAGAGAAGATGCATCAGATAGCACGATCTTGAGTCATTTTAACGAGGCTTATAATACCTCTTTACAGTTCTCCAGAAAGTTCGGTAGTCAGAAAGACGATAATTCTTCTATTCAGACAGCTCTATCTGTATGTGAAGAAAATCCACCTTATCGCCACTTTTCAGGCTCATCAATATCTACAGGATCCATCAATTCTCATAGCAATCTATGTCAGAATTTTGCATTTCCTCCTCCTCCTCCAGGTGATAGGAGACGGCCTGGACCCAGACCTTGTCCTGTATGTTACCTTCCTGTGGAGGAGGCTATGGGTAGCATGCCAAGCTCCCCCTCAGCATCACCTGTGGTTCAACACTTAACTTATTTTCATGAAGAAACTTCTACTAAAACAGAACCACATGAAGGCTCAGACTTTGGTGGGTATCCTTCCATAAAACAGAGAAATGAATCTTTTGATATAAAAGAATCAATGACTGTGCATTGTGGATTTGTAAAAGGATGCAGACCTGGTTACCAAACTGGCTTCGATATCGATGTATCTGATCTTGTGGAGTTGGAGCAGTTTCATGATATTATTGTTGCATCAGCCATATTTGGAAACTATGATGTGATTCAACAGCCAACTAAGATTAGCGAGGCTGCTAGTAGAAACATCCCGTTTTATATGTTTATTGATGAAGAGACAGAAGCATATATGAGAAATTCTAGTGCTTTGGACTACAGAATGAAGGTTGGATTGTGGAGAATTATTGTTGTGCATAATGTTCCCTACGCTGATTCTAGACGTAATGGAAAGGTGCCAAAGCTTCTACTACACAGACTCTTTCCAAATGTTCGGTATTCTGTATGGATTGACGGGAAGCTACAACTCGTGGTGGATCCGTATCAACTTCTTGAGAGATTCTTGTGGCGCAATAATGCCACTTTTGCAATTTCAAAACATTATAGGCGGTTTGATGTGTTTGAAGAAGCTGAGGCTAACAAGGCTGCAGGGAAATATGACAATGCATCCATTGATTACCAGATTGACTTTTATAGAAAAGAGGGTTTAACACCTTATTCTGAGGCTAAGCTTCCTATAACCAGTGATGTCCCGGAAGGGTGTGTTATCATAAGAGAACACATTCCGATAACAAATCTCTTCACGTGTTTGTGGTTCAATGAAGTTGACCGGTTTACTTCAAGAGATCAGTTGAGCTTTGCTACTGTAAGGGACAAAATCATGGCTCAGGTTAACTGGAGCATCAACATGTTCATGGATTGTGAAAGGCGTAACTTCGTGATACAGGCATACCACCGAGATCTACTAGAGCACATGCCGCCTCCTGCAGTTATAACAAGTAACTCAAAGCGTGCCCGAGTTAATGTTCCTGTTCCGGTTTCTGTTTTGGGTCGGGGTAGCTCACCTGCTAAGAACTCGGCAAAGAAAACCCCTGTTAAACGTGGGAAAGGGGAGAGGAGATCTCGTGCTAGGAGACACCCGAAATATTCGAGTAACAGGGACAACACGATCTTTTGA | 1764 | 41.84 | MTGVSLDLRTQSYGSPQQPQNGSLQTQNGFSVRKTSRMSLSGSREKDKFLPFLCRYLSRKKVVMMILVSFALMAFLSGFFTVNREDASDSTILSHFNEAYNTSLQFSRKFGSQKDDNSSIQTALSVCEENPPYRHFSGSSISTGSINSHSNLCQNFAFPPPPPGDRRRPGPRPCPVCYLPVEEAMGSMPSSPSASPVVQHLTYFHEETSTKTEPHEGSDFGGYPSIKQRNESFDIKESMTVHCGFVKGCRPGYQTGFDIDVSDLVELEQFHDIIVASAIFGNYDVIQQPTKISEAASRNIPFYMFIDEETEAYMRNSSALDYRMKVGLWRIIVVHNVPYADSRRNGKVPKLLLHRLFPNVRYSVWIDGKLQLVVDPYQLLERFLWRNNATFAISKHYRRFDVFEEAEANKAAGKYDNASIDYQIDFYRKEGLTPYSEAKLPITSDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQLSFATVRDKIMAQVNWSINMFMDCERRNFVIQAYHRDLLEHMPPPAVITSNSKRARVNVPVPVSVLGRGSSPAKNSAKKTPVKRGKGERRSRARRHPKYSSNRDNTIF | 587 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pdy4g00618 | 587 | MobiDBLite | consensus disorder prediction | 543 | 587 | - | - | |
| Pdy4g00618 | 587 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
| Pdy4g00618 | 587 | Pfam | TOD1-MUCI70, glycosyltransferase-like domain | 201 | 514 | IPR048354 | - | |
| Pdy4g00618 | 587 | PANTHER | ALKALINE CERAMIDASE-RELATED | 34 | 547 | IPR006852 | - | |
| Pdy4g00618 | 587 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
| Pdy4g00618 | 587 | MobiDBLite | consensus disorder prediction | 558 | 576 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pdy4g00618 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pdy | Pdy-Chr2:33687575 | Pdy4g00618 | Pdy-Chr4:11345885 | dispersed | |
| Pdy | Pdy-Chr4:11345885 | Pdy7g01056 | Pdy-Chr7:45673967 | dispersed | |
| Pdy | Pdy-Chr4:11345885 | Pdy4g04362 | Pdy-Chr4:95600051 | wgd |