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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pdy4g00622	ATGACCCCCAAATCGCTCTGTACTACATCTTCGTCGAATCACGGAGAATTCGTGATGTCCACCAAGTCGTTGATTTTGCATGGCGTCGCCGCTGCCGCCGCTTTAGTCGTCGGTGCTCATGCTTACTATTTTTACCGCCGATCTGCCACCATGTTTCGGAGTCGAGTAGTCGGCATAATTCCAGCTCGTTACGCTTCTTCGCGGTTTCAGGGGAAACCCCTCGTTGATATCCTCGGCAAACCCATGATCCAGAGAACGTGGGAGAGAGCAAAGTTGGCAACCACATTGGATTGTGTTGTTGTGGCAACGGATGACGAAAAGATTGCAGAATGTTGTCGAGGATTTGGTGCTGATGTAATAATGACTTCAGAATCATGCAGAAATGGCGCTGAGAGGTGTAGTGAAGCACTTCAAAAGCTTGAGAAAAAGTATGATATTGTTGTCAATATTCAAGGAGATGAGCCTCTTATTGAACCTGAAATAATTGATGGGATTGTCAAAGCTCTTCAGACCACCCCAGATGCAGTTTTCAGTACTGCAGTCACATCTTTGAAACCAGAAGATGCTTTTGATCCAAATCGTGTGAAATGCGTGGTTGATAATCATGGTTATGCAATCTACTTTTCTCGAGGGCTGATTCCTTTTAACAAGTCTGGGAAAGCCAATCCTGAATTCCCATATAATCTTCACCTCGGTATTCAGAGCTATGATTCGAAATTTCTAAAAATCTATCCGGATCTGACTCCAACTCCTTTGCAACTTGAAGAAGACTTGGAACAGCTTAAAGTTCTTGAGAATGGTTACAAGATGAAGGTAATAAAAGTGGATCATGATGCTCATGGTGTTGATACACCAGAAGATGTTGCCAAGATTGAAAGTTATATGCGTGAGAGGAACTTGTCATAA	906	43.38	MTPKSLCTTSSSNHGEFVMSTKSLILHGVAAAAALVVGAHAYYFYRRSATMFRSRVVGIIPARYASSRFQGKPLVDILGKPMIQRTWERAKLATTLDCVVVATDDEKIAECCRGFGADVIMTSESCRNGAERCSEALQKLEKKYDIVVNIQGDEPLIEPEIIDGIVKALQTTPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPFNKSGKANPEFPYNLHLGIQSYDSKFLKIYPDLTPTPLQLEEDLEQLKVLENGYKMKVIKVDHDAHGVDTPEDVAKIESYMRERNLS	301

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pdy4g00622	301	Hamap	8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB].	54	296	IPR004528	GO:0008690(InterPro)
	Pdy4g00622	301	SUPERFAMILY	Nucleotide-diphospho-sugar transferases	56	298	IPR029044	-
	Pdy4g00622	301	CDD	CMP-KDO-Synthetase	55	294	IPR004528	GO:0008690(InterPro)
	Pdy4g00622	301	FunFam	3-deoxy-manno-octulosonate cytidylyltransferase	54	296	-	-
	Pdy4g00622	301	Gene3D	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	46	296	IPR029044	-
	Pdy4g00622	301	Pfam	Cytidylyltransferase	57	269	IPR003329	-
	Pdy4g00622	301	NCBIfam	3-deoxy-manno-octulosonate cytidylyltransferase	58	288	IPR004528	GO:0008690(InterPro)
	Pdy4g00622	301	PANTHER	3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE	8	300	-	GO:0005829(PANTHER)\|GO:0008690(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pdy4g00622	K00979	3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Pdy	Pdy-Chr4:11377576	Pdy4g04365	Pdy-Chr4:95618997	wgd