AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00644 ATGGGGAAATCAGGAAGAGATTGGACTCAGATCTATTCAATATATGGCATGGACGATTGGCACACACCGATTTTTCTGTTGATTCACGCGATTGTGTTTTCAGCTTCATCAATCGTATTTCTACTGTACTTCAACTGGATCTGTTACTCGTTTGAATTAATTTTACCGTCGGTATTCTCTGGCAGTTTCGCCAGATTCGCCGCAGGATTCACCGGCTCCGTCACCGCTCTCTCCGCTGTCTGCCTCTTCTACGCCGCCGGAAACATGTTCTACTCATCCGTCGCCCTTCGCTGGGAAATGGCCCAGCGCATGGTGAGCGCCGTCCACGACTGGTCAACCGTGAAGACCGTCCTCGACGTCGGCTGCGGTCGCGGCATCCTCCTCAACGCCGTCGCCATGCAGCTAAAAAAAGAAGGCAGTTCCGGCCGTGTGGTCGGGTTAGACCGTAAGAACACCACCTTATCCACCCTAAGAACGGCAGGGATGGAGGGCGTGCAGGAGTACGTCACCTGCCGTGAAGGCGACGCGCGTAGACTGCCGTTCCCGGACAACTACTTCGACGTGGTTGTGTCGGCGGGTTTTGTGCACAAGGTTGGGAAGGAATTTGGAGCGAAAACAGCGGCGGCATCTGCGGAGAGAATGAGGGTGATGGGGGAGGTGGTGAGGGTGTTGAAGGAGGGCGGAGTAGGGGTGGTGTGGGACCTGGTGCACGTGCCGGAGTACGTTCTCCGGCTACAAGAATTGAAGATGGAAGAGATCAGAGTGTCGGAGAGAGTAACGGCGTTCATGGTGAGCAGCCACATCGTGTCATTTCGGAAGCCCAGCCAGCACGTGTTGGGTCCCAGTGAAGTAAGATTGGATTGGAGATTCAACAATATCTCCTGA 885 54.58 MGKSGRDWTQIYSIYGMDDWHTPIFLLIHAIVFSASSIVFLLYFNWICYSFELILPSVFSGSFARFAAGFTGSVTALSAVCLFYAAGNMFYSSVALRWEMAQRMVSAVHDWSTVKTVLDVGCGRGILLNAVAMQLKKEGSSGRVVGLDRKNTTLSTLRTAGMEGVQEYVTCREGDARRLPFPDNYFDVVVSAGFVHKVGKEFGAKTAAASAERMRVMGEVVRVLKEGGVGVVWDLVHVPEYVLRLQELKMEEIRVSERVTAFMVSSHIVSFRKPSQHVLGPSEVRLDWRFNNIS 294
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00644 294 PANTHER EXPRESSED PROTEIN 1 289 - -
Pdy4g00644 294 Gene3D Vaccinia Virus protein VP39 84 260 IPR029063 -
Pdy4g00644 294 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 96 247 IPR029063 -
Pdy4g00644 294 CDD AdoMet-MTases 116 236 - -
Pdy4g00644 294 Pfam Methyltransferase domain 118 230 IPR013216 GO:0008757(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00644 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pdy Pdy-Chr3:9323025 Pdy4g00644 Pdy-Chr4:11720528 wgd