Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pdy4g00655 | ATGGGTTTGCCTCTTAAACTCGCCGTACTTTCCGCCGCCGTCATGTCCACCGCCGTCATGATCAACTTCTTATCACCCTTCTTCATTAATTTCACAATCTCCGACCTTCCTATCATATACACCTCATTTATCTCCTGGCTCAAACCACCCTATCTTTACGTTGTTATCAACTGTATCATCATCACTATCGTCGCTTCTTCACGGTTGCAGTCCAAGCTCGACGGTCATTCTCACTCGCTCTCTACTTTCCCTGCACCGGTCCTGATCCCGGCTCACGAACCCGTCAAGGTTGTGCTTCCTGTTGAACTACCACCCGTTTATCATGAACCGGAAGTACCCGAACTGGTGAAGGTTGTTGACGGCGGTTATAACAGTGGTTCGAGATTTGGTCAAGTAATACCTGAACCCGAGTTCAGCGCTCCTGATGATGAGTTAATTACGGATAATTTTATGGATGAAGATATGAAGATCGCGAAGGAAGCTTATGAAGAAATCAAGAAAAGTAGCAGCAGGGACAGTGTTAATTATAATAAATCTGTAATCTCGATGCCTGTCGCCTTTACGCCGCCTTCGAAAATGAATCAAGTGGAGTTATCTTCACCACCGGTGCAGAAACCACCAGCCTCCGCCAGATTTGGCCACCGGAAACCTGCAAAAGCCACCCTCGAAGGTGGGCGGACATTGAGAGTTTCAAAACCCAAGCGGCAAGACACGCTGGAGACCACATGGAAGGCAATAACGGAGGGTCGTGCGGTACCTTTAACGAGACACCTCCGTAAATCCGACACGTGGGAGACCCACGTTAACGGTCGTCAAACTCACGTTAACTCCGAGGAGGAGTTACAGCTACCGATCGATGATCATAGTCACTCCGACAGGATGACAAAATCAGAAACGTTCGAGGTGAAGAGTGGCGGTGGCAGCCGGAAACCACCGGCAGCGCCGTCGAAGCTGAGCCGGTCGGGAGGGTCAGGAAGGCTGAGGAAAGAACCGTCGTTGGGGCAGGAGGAGTTGAACCGGAGAGTTGAAGCATTTATAAAGAAATTTAACGAGGATATGAGGTTGCAGAGGCAGGAATCGATGAACCAGTTTATGGAGATGATTAACCGTGGGGCCCATTAA | 1122 | 49.47 | MGLPLKLAVLSAAVMSTAVMINFLSPFFINFTISDLPIIYTSFISWLKPPYLYVVINCIIITIVASSRLQSKLDGHSHSLSTFPAPVLIPAHEPVKVVLPVELPPVYHEPEVPELVKVVDGGYNSGSRFGQVIPEPEFSAPDDELITDNFMDEDMKIAKEAYEEIKKSSSRDSVNYNKSVISMPVAFTPPSKMNQVELSSPPVQKPPASARFGHRKPAKATLEGGRTLRVSKPKRQDTLETTWKAITEGRAVPLTRHLRKSDTWETHVNGRQTHVNSEEELQLPIDDHSHSDRMTKSETFEVKSGGGSRKPPAAPSKLSRSGGSGRLRKEPSLGQEELNRRVEAFIKKFNEDMRLQRQESMNQFMEMINRGAH | 373 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pdy4g00655 | 373 | MobiDBLite | consensus disorder prediction | 263 | 337 | - | - | |
| Pdy4g00655 | 373 | MobiDBLite | consensus disorder prediction | 193 | 217 | - | - | |
| Pdy4g00655 | 373 | Pfam | Cotton fibre expressed protein | 335 | 370 | IPR008480 | - | |
| Pdy4g00655 | 373 | PANTHER | COTTON FIBER (DUF761) | 16 | 371 | - | - | |
| Pdy4g00655 | 373 | MobiDBLite | consensus disorder prediction | 280 | 299 | - | - | |
| Pdy4g00655 | 373 | Pfam | Domain of unknown function (DUF4408) | 37 | 69 | IPR025520 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pdy4g00655 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pdy | Pdy-Chr2:38696404 | Pdy4g00655 | Pdy-Chr4:11865034 | dispersed | |
| Pdy | Pdy-Chr4:11865034 | Pdy4g04411 | Pdy-Chr4:96219258 | wgd |