AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00659 ATGGCAAGCGGGAAAACTTCGGTTCTAATCGTTTTCGCAACAATTGCTGTTTTCGGTGCACTCACTCAGGTGAAAGCTTATTCAAGCTCGTACTGCAGCACTTGGTCTCGTTGTGCGGGGCAGACCCTTTATTGCCCCTCAGAATGCCCCTCGAGTGAATCCGAGGACCCCAAGGCTAAAGTTTGTCGTATCGACTGCTACTCACCAAAATGCAAAGCCGAATGCAAACAGCGTAAGCCCAATTGCAACAGCCCAGGATCCGCATGCTACGACCCACGGTTCATCGGCGGCGACGGCATTGTTTTCTACTTTCACGGCAAGGTTAATGAGCATTTCAGTTTGATCTCCGACAACAACCTCCAAATCAACGGTCGATTCATCGGTCACCGACCCACCGGAAGATCCAGAGACTTCACCTGGATCCAAGCATTGGGTGTCCTCTTCAATTCCCACAGTTTCTCTCTAGAAGCCACCAAATCCGCCACCTGGGACGGCGAAGTCGACCACCTGAAACTCTCCTACAACGGTGAAGAAATTTCCCTACCTGTTGGCGGTCTTTCCACCTGGAAATCACCGGAAGATGATATCAAAGTGGAGAGAACTTCTGGGGTGAACAGCGTTTTGGTCACCGTTCCCGGAGTGGTGGAGATTTTGGCAAATGTTGTGCCAGTGACGGCGGAAGACGACAGAATCCATGGTTACAAAGTTCCTTCCGATGATTGCTTTGCTCACTTAGAAGTTCAATTCAGGTTCGCCGGACTTTCTGACGGAGTTGAAGGGGTGTTGGGGAGGACTTATCAGCCGGATTTCAAGAACCCGGCGAAGCCAGGGGTGGCCATGGCGGTTGTGGGAGGAGAAGATAAGTACAAAATTAGCTCATTGCTGTCAGCTGATTGCGCAAACTGCATCTTTGATTCGAGTAATGTTGCAGAGAAAGAGAAAGAGATAGAGAAAGAAACTTTGGATTGCACTGCCAAGGGAATGTTCCATGGAAATGGGATAGTCTGCAAGAAATGA 1017 49.66 MASGKTSVLIVFATIAVFGALTQVKAYSSSYCSTWSRCAGQTLYCPSECPSSESEDPKAKVCRIDCYSPKCKAECKQRKPNCNSPGSACYDPRFIGGDGIVFYFHGKVNEHFSLISDNNLQINGRFIGHRPTGRSRDFTWIQALGVLFNSHSFSLEATKSATWDGEVDHLKLSYNGEEISLPVGGLSTWKSPEDDIKVERTSGVNSVLVTVPGVVEILANVVPVTAEDDRIHGYKVPSDDCFAHLEVQFRFAGLSDGVEGVLGRTYQPDFKNPAKPGVAMAVVGGEDKYKISSLLSADCANCIFDSSNVAEKEKEIEKETLDCTAKGMFHGNGIVCKK 338
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00659 338 Pfam Root cap 248 304 IPR009646 -
Pdy4g00659 338 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 28 338 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00659 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pdy Pdy-Chr2:37817381 Pdy4g00659 Pdy-Chr4:11935310 dispersed
Pdy Pdy-Chr2:113425841 Pdy4g00659 Pdy-Chr4:11935310 dispersed
Pdy Pdy-Chr2:113435056 Pdy4g00659 Pdy-Chr4:11935310 dispersed
Pdy Pdy-Chr4:1366987 Pdy4g00659 Pdy-Chr4:11935310 dispersed
Pdy Pdy-Chr4:1397610 Pdy4g00659 Pdy-Chr4:11935310 dispersed