Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pdy4g00669 | ATGCAACCCCAGAAACCCCTACCGGAATCTGACCTACCCTCCCTCGCCGCCATCAAAGTCAAGTCTTCCTCCCCTCGTTTCCGTCCTACTGCCAACCCTTCCGCCACCGAAACCCCTACTGCCGGCGCCCAACGCCGGATAGGCATCGCCGTCGATCTTAGCGACGAGAGTGCCTTTGCTGTCAAGTGGGCCGTCCATCAGTATCTTCGCCCTGGTGATGCCGTGATCCTCATCCACGTCCGTCCTACTTCCGTTCTTTACGGCGCTGACTGGGGCTCTGTTGACCTTTCCATCGTTGACACTGACGATGAGGCATCGAAGCTAAAGCTTGAAGACGATTTTGATACTTTCACGACTACCAAATCCGCTGACCTAGCACAGCCTCTGGTGGACGCGCACATACCGTATAAGATCCATATAGTTAAAGATCATGACATGAAGGAGAGGCTTTGTTTAGAGGTGGAGAGGCTAGGGTTGAGTGCTGTGATTATGGGAAGCCGAGGGTTCGGTGCGACGAAACGCGGGAGCGACGGCCGGCTTGGGAGTGTTAGTGATTACTGTGTACGCCACTGTGTGTGTCCGGTGGTGGTTGTGAGGTATCCCGATGAGAAGGATGCTTCTGCTTCTGCTGAGCCTGTGGTTTCGGTGGCTACTGCTGACGATGAAGAAGACGAACCTGAATATCATGATGCAACTGATGAGCGAAAATAA | 711 | 53.87 | MQPQKPLPESDLPSLAAIKVKSSSPRFRPTANPSATETPTAGAQRRIGIAVDLSDESAFAVKWAVHQYLRPGDAVILIHVRPTSVLYGADWGSVDLSIVDTDDEASKLKLEDDFDTFTTTKSADLAQPLVDAHIPYKIHIVKDHDMKERLCLEVERLGLSAVIMGSRGFGATKRGSDGRLGSVSDYCVRHCVCPVVVVRYPDEKDASASAEPVVSVATADDEEDEPEYHDATDERK | 236 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pdy4g00669 | 236 | MobiDBLite | consensus disorder prediction | 20 | 43 | - | - | |
| Pdy4g00669 | 236 | Pfam | Universal stress protein family | 45 | 199 | IPR006016 | - | |
| Pdy4g00669 | 236 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 45 | 202 | - | - | |
| Pdy4g00669 | 236 | Gene3D | HUPs | 34 | 211 | IPR014729 | - | |
| Pdy4g00669 | 236 | MobiDBLite | consensus disorder prediction | 25 | 41 | - | - | |
| Pdy4g00669 | 236 | MobiDBLite | consensus disorder prediction | 204 | 236 | - | - | |
| Pdy4g00669 | 236 | PANTHER | OS01G0783500 PROTEIN | 8 | 235 | IPR044162 | - | |
| Pdy4g00669 | 236 | CDD | USP-Like | 46 | 198 | - | - | |
| Pdy4g00669 | 236 | PRINTS | Universal stress protein signature | 44 | 62 | IPR006015 | - | |
| Pdy4g00669 | 236 | PRINTS | Universal stress protein signature | 177 | 199 | IPR006015 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pdy4g00669 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pdy | Pdy-Chr4:12088562 | Pdy7g01203 | Pdy-Chr7:50514085 | dispersed | |
| Pdy | Pdy-Chr4:12088562 | Pdy4g04438 | Pdy-Chr4:96664342 | wgd |