Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pdy4g00720 | ATGGCGATCTCACGCCACAAACACACACTAATCCTCACTCTACTATGTGTTCTTCTCCCGTTTTCTCAATCGGAATCGGCGCCGGAATCGGTGGCGGAATCCTCCATTCACGATCTCCTCAAAAGCAAAGGACTGCCGGTCGGCCTGTTCCCCAAGGAAGTCGAATCATTCACTCTCTACGACACTGGCCTTCTAGAGGTCTTCCTGAGAGGTCCGTGCTTAACCAAATTTGACACCATGGCGTTCTACGAAAGCACCGTCAGAGCTAACCTTACTTACGGCAGCCTTACCGGCGTTCAAGGCCTCTCTCAGGAAGAGCTCTTCCTCTGGCTTCCGGTCAAAGATATCATCGTCGACGATCCGAAATCTGGACTCATATTATTCGACATTGGCCTCGCTCACAAACAGCTTTCTCTCTCGCTATTCGAAGATCCACCTGACTGCAAATCCGAAGGTGGTTTGAATTTGAAGAAGAAATCTAGAAAGGAGAGAGGATTTGCTGCTCAAATGTAG | 513 | 49.32 | MAISRHKHTLILTLLCVLLPFSQSESAPESVAESSIHDLLKSKGLPVGLFPKEVESFTLYDTGLLEVFLRGPCLTKFDTMAFYESTVRANLTYGSLTGVQGLSQEELFLWLPVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPDCKSEGGLNLKKKSRKERGFAAQM | 170 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pdy4g00720 | 170 | FunFam | Uncharacterized protein At3g07460 | 23 | 153 | - | - | |
| Pdy4g00720 | 170 | PANTHER | T31J12.3 PROTEIN-RELATED | 27 | 149 | IPR007493 | - | |
| Pdy4g00720 | 170 | SUPERFAMILY | At5g01610-like | 8 | 150 | IPR036758 | - | |
| Pdy4g00720 | 170 | Gene3D | - | 24 | 151 | IPR036758 | - | |
| Pdy4g00720 | 170 | Pfam | Protein of unknown function, DUF538 | 36 | 143 | IPR007493 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pdy4g00720 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 4116030 | Pdy | Pdy4g00720 | Pdy-Chr4:13201650 | Pdy8g02586 | Pdy-Chr8:61684098 | |
| 4136406 | Pdy | Pdy4g00720 | Pdy-Chr4:13201650 | Pdy5g02512 | Pdy-Chr5:74884309 |