Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pdy4g00733 | ATGACTAGCGTACAACTTGAGGTTGTATCAGAAGACCATTCTCCACATAAATGGTGTGTTCCTTTAAAAGAAGACGTTTTTTGTGCCTTTATGGCGAAAGGAGGTTCAATCGTGCATAAGAACCAGTGTGTGGATTGGTTTCAAACAGACGCGTGTTATGTTTTAAGATCCGAAATACCAAAATTAGAAAAAAACAGCATTCGAGTTTATGTTGAGAAAGGGAAGGTTGTGGAGATTAGTGGGCTATGGAAGCACAAGGGAGAATCAAGAACAATAGACTGGCGAAGTGGCGAATGGTGGGAACATGGCTTTGTTAGGAGGCTTGAATTGCCTGAAAATGTAGACTGGAAGAAAATCGAGGCGTATGTGAATAACGACAACATCTTGGACATTAGACTTCCAAAAACTTCATTGGATTCTGATGTATATCGAGGAAACGAAGGGGTGAGCAAAGATTCTGCATCTGCAAGCGCTTGA | 477 | 41.3 | MTSVQLEVVSEDHSPHKWCVPLKEDVFCAFMAKGGSIVHKNQCVDWFQTDACYVLRSEIPKLEKNSIRVYVEKGKVVEISGLWKHKGESRTIDWRSGEWWEHGFVRRLELPENVDWKKIEAYVNNDNILDIRLPKTSLDSDVYRGNEGVSKDSASASA | 158 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pdy4g00733 | 158 | Gene3D | - | 28 | 142 | IPR008978 | - | |
| Pdy4g00733 | 158 | PANTHER | 21.7 KDA CLASS VI HEAT SHOCK PROTEIN | 3 | 40 | - | - | |
| Pdy4g00733 | 158 | ProSiteProfiles | Small heat shock protein (sHSP) domain profile. | 35 | 152 | IPR002068 | - | |
| Pdy4g00733 | 158 | SUPERFAMILY | HSP20-like chaperones | 36 | 137 | IPR008978 | - | |
| Pdy4g00733 | 158 | Pfam | Hsp20-alpha crystallin family | 46 | 138 | IPR002068 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pdy4g00733 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 4116039 | Pdy | Pdy4g00733 | Pdy-Chr4:13368529 | Pdy8g03091 | Pdy-Chr8:68081904 | |
| 4136412 | Pdy | Pdy4g00733 | Pdy-Chr4:13368529 | Pdy4g02911 | Pdy-Chr4:76735915 |