AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00759 ATGGCGTCCATGGCTACAAACTTTGCCTCATCTCTCTCCACCAAATCCAAGACCTGTTTCTTGGACCAATCATCCTTCCATGGCGTTCCGATTTCTTCTCCGATCCGGATCCAACCGGTGAAGTCGAACCGAAACAAAACCACGCCGATCACCATGTCTGCTACCCCTTACGATCTCGGATCTTTCACCTTTAAACCGATCAAGGAAGCGATCGTATCTCGTGAAATGACCAGGAGGTACATGACCGACATGATCACCTACGCTGACACCGACGTCGTCATCGTCGGTGCTGGTTCTGCTGGTCTCTCTTGCGCCTATGAGCTTAGCAAAAACCCTAACGTTCAGGTCGCCATCATCGAGCAATCTGTGAGCCCCGGTGGTGGAGCATGGTTGGGAGGACAACTCTTCTCCGCCATGGTTGTCCGGAAACCTGCACACCACTTCCTTGACGAGCTGGAGATCGAGTATGACGAGCAAGAAGATTATGTTGTCATCAAGCACGCAGCTTTGTTCACCTCCACCATCATGAGCAAGCTTTTAGCCAGGCCAAATGTGAAGCTATTTAACGCAGTTGCAGCTGAGGACCTGATCATCAAGGGAGGGAGAGTAGGTGGTGTCGTGACTAACTGGGCTTTGGTAACAATGAACCACGACACACAATCCTGCATGGACCCGAATGTGATGGAAGCTAAGGTGGTTGTGAGCTCGTGTGGGCATGATGGTCCCATGGGTGCCACCGGGGTCAAGCGGCTCAGGAGCGTTGGGATGATCGAGAGTGTTCCTGGGATGAAAGCTCTTGACATGAACACTGCTGAAGATGCAATTGTTAGGCTTACAAGAGAGATTGTTCCTGGCATGATTGTAACAGGGATGGAAGTTGCAGAGATTGATGGATCTCCAAGAATGGGGCCAACATTTGGGGCTATGATGATATCCGGACAGAAGGCTGCACATTTGGCGTTGCAGGCGTTGGGGCTCCCGAATGCTTTGGATGGAACGAGTGTCGGAAGCCTGCCGGAGCTCATCCTTGCTGCAGCGGATTCCGGTGAGACTGTGGATGCCTAA 1065 51.92 MASMATNFASSLSTKSKTCFLDQSSFHGVPISSPIRIQPVKSNRNKTTPITMSATPYDLGSFTFKPIKEAIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHHFLDELEIEYDEQEDYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIIKGGRVGGVVTNWALVTMNHDTQSCMDPNVMEAKVVVSSCGHDGPMGATGVKRLRSVGMIESVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGSPRMGPTFGAMMISGQKAAHLALQALGLPNALDGTSVGSLPELILAAADSGETVDA 354
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00759 354 FunFam Thiamine thiazole synthase, chloroplastic 89 324 - -
Pdy4g00759 354 Hamap Thiamine thiazole synthase, chloroplastic [THI4]. 6 333 IPR027495 GO:0009228(InterPro)
Pdy4g00759 354 Gene3D - 58 88 - -
Pdy4g00759 354 Pfam Thi4 family 73 306 - -
Pdy4g00759 354 Gene3D - 89 324 IPR036188 -
Pdy4g00759 354 NCBIfam sulfide-dependent adenosine diphosphate thiazole synthase 69 323 IPR002922 -
Pdy4g00759 354 PANTHER THIAMINE THIAZOLE SYNTHASE 13 353 - -
Pdy4g00759 354 SUPERFAMILY FAD-NAD(P)-binding domain 55 317 IPR036188 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00759 K03146 cysteine-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.60]