AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00785 ATGGCATCCCTTTCTTCATCATTCATCTTCATATGCAAAACCCACTTCGTAAGAACCCTAATCTTCGTCTTACTCTCTTTCTGTACCCACACTCCAAAAGTACAAGCCTTTAAATCACTAATTCGCCCACAAGACATACTCCCACTTTTGCCCCGGCAAGTTTCGTGGCCTATTCTCAACTCTCTTCGAGGTGCTGCCGATCTGCTGCCGAGTTTCGTCGGCGCCGCCGCTGTTGCGAATAACTCCGTCTTGCAGTGGAAGGGGTCTTGCTTTTATCAGAACACGGCGTGGTTAGAGCTTCATAATAAAAGTGGTAGTGAATTTGGGGGAGGCACTCTTCATATCAAGGTAAGCAATGCACATAGTTGGACATGTATGGATATTTATGTCTTTGCTACTCCATATCGTGTTACATGGGACTATTATTTCTTATCTCGTGAGCATACACTCGAATTCGATGAGTGGGGAGGCAAAGCCGAGTATGAATATGTAAAACGTAAGGGAGTAGCAATATTCCTCATGGAAGCAGGGATGATAGGAACCCTAGAAGCCTTGTGGGAGGTCTTCCCGTTGTTCACAAATACTGGGTGGGGCGAAAGTTCTAACATTGCTTTTCTCAAGAAACATATGGGAGCTAACTTTGAAGCCCGACCAGAACCATGGGTAACAAACATTACCCAAGATGATATTCACTCTGGAGACTTCCTTGCAATATCAAAGATTCGTGGTCGATGGGGCGGGTTTGAGACACTTGAGAAATGGGTATCCGGGGCATACGCGGGTCATTCTGCTGTTTGCTTAAGGGACCCGGAAGGAAAGCTATGGGTTGGGGAATCTGGACATGAAGATGAAGAGGGTCAAGATGTTATTGCTTTGTTGCCATGGGATGAGTGGTGGAACTTTGAGTTGACTGAAGATGATGCTAATCCACATATTGCTTTGCTTCCTTTGCATCCTGACCTTCGGTCCAAATTTAATGAGACCGCGGCTTGGGAGTATGCACAAAGTATGATAGGGTTGCCATATGGTTATCATAATTTGATTTTTAGCTGGATAGACACTGTTAGTGATAATTACCCGCCACCTTTGGATGCTAATCTGGTTGCTTCTGTTATGACCGTGTGGAATCAGTTGCAGCCTGCATATGCAGCTAATATGTGGAATGAAGCCTTAAATAAGCGGCTTGGTACTAAGGGGCTTGACCTCGCGGATATTTTAGTCGAAGTTGAAAGGCGTGGTTCATCTTTTGCGGAATTATTGACCATACCCGAACAAGATGACTGGGTATACGAAGATGGAAAGTCAACTTCATGTGTCGCTTTTGTCCTTGAAATGTACAAGGAAGCCGGACTCTTTGGTGATTTTGCAGATGAAATTCAAGTTACTGAGTTCACAATAAAGGATGCTTACACGCTCAACTTTTATGAAAACAATTCGAGCCGCCTGCCAAAGTGGTGTAACGAAGGCGACACTGTTGACCTTCCGTTTTGTCAAATCAAAGGAAAGTATCGAATGGAACTACCTGGATACAATACTATTGAGCCTTACCCTCACATGACAGAAAGTTGTCCCTCACTACCTCCAGACTATTCAAGGCCCAAATACTGCTGA 1611 44.57 MASLSSSFIFICKTHFVRTLIFVLLSFCTHTPKVQAFKSLIRPQDILPLLPRQVSWPILNSLRGAADLLPSFVGAAAVANNSVLQWKGSCFYQNTAWLELHNKSGSEFGGGTLHIKVSNAHSWTCMDIYVFATPYRVTWDYYFLSREHTLEFDEWGGKAEYEYVKRKGVAIFLMEAGMIGTLEALWEVFPLFTNTGWGESSNIAFLKKHMGANFEARPEPWVTNITQDDIHSGDFLAISKIRGRWGGFETLEKWVSGAYAGHSAVCLRDPEGKLWVGESGHEDEEGQDVIALLPWDEWWNFELTEDDANPHIALLPLHPDLRSKFNETAAWEYAQSMIGLPYGYHNLIFSWIDTVSDNYPPPLDANLVASVMTVWNQLQPAYAANMWNEALNKRLGTKGLDLADILVEVERRGSSFAELLTIPEQDDWVYEDGKSTSCVAFVLEMYKEAGLFGDFADEIQVTEFTIKDAYTLNFYENNSSRLPKWCNEGDTVDLPFCQIKGKYRMELPGYNTIEPYPHMTESCPSLPPDYSRPKYC 536
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00785 536 PANTHER OS01G0793500 PROTEIN 17 536 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00785 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
132021 Pdy3g00438 Pdy4g00785
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
4134519 Pdy Pdy2g00344 Pdy-Chr2:6291426 Pdy4g00785 Pdy-Chr4:13974550
4174984 Pdy Pdy3g00438 Pdy-Chr3:7984854 Pdy4g00785 Pdy-Chr4:13974550