AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00793 ATGGGTTGCAGAAATCGAGGAGACGAAGCAGCAGATGAAGAACAAGAAAGAAGAAGATCACACCCATCTTCATTTGTAAACGACGCGTTGCTCTTAACAACCATGTGTCTCATTGGCATGTCTGTTGATGTTCATATCAAGGATGGCTCTGTTTATTCTGGAATCTTCCACACTGCCTGTGTCGACGACCGTTATGCTATCGTGTTGAAGAGAGCAAAGATGATCAAGAAAGGGAGTTGTAATTCAAATGTGGCGAATGAGGAGGTGATAGCAACCCTTGTAATCCAATCAGAGGATCTTGTTCAAGTAGTTGCAAAGAAAGTAATTCTTCCAGCAGATGGTGTTGCTGGACATGAAACTGGAGACGTTACAGGGGCTGTTGCATGTTCTTTTCCTTGTAACGGAACTCCATCAACAGAAGCAAATAAAACAACTTCTAGCCAGTCAAATGTTGGACAGCCACATACAAATCAAACAAGATGCTCGTCTGGAAATGAGAACGGGTTTGCTAATGGATCTAGACCCGAGAATGCTAATCACTCAACCAACGCTCTTGAAGTAAAAAATGCAGACATGAGAGGTTCAACAAAGAAAGGAGGATTGACTGATTCAGATGATAACAGAAAGAATGCTAATCACACTAGTTCTTCAGAACCAGTTGTTAGTTCATCAGCTACAAATGAAACTGTCAGTGCAAAAATCTCAAATTCAAACCGAACCACCAAGGAGTTTAAACTTAACCCTGGAGCAAAGATATTTTCGCCATCATTTCCAAATAAGAGATCATCGACTCCTCCAGCAATGGCAATGACAGCGGGTGCAAATCTTGCATACATTCCCGACAGTTATCCTGGCATCCCGGTTGCCAGTCCACAGCCCGAAGTTGAAATCAGCCCGTTTGCTACCCGTTCCCTGCCCATTAAGTTTCTTCCATATGGAGGCAATGATGTACCACATCCTCCACCTGTTGTTGGATATATGACAAACAGGAGTCAACCCGTGAGATATGTTGGGCCATATCATCCGATTCAAACGCCACCTCCCTATGTGCAACCAAGCTCTCAAAATGTAATGGTTGGAAGATTAGGACCGGTTGTCTATGTTCATCCGGTTTCTCAAGACATGGTCCCGCACACGAATGGGTTCTCTCAAGTGTCTACTTGCAATATTTTAACTCCGCAGCAAGTTCATGTCCCCAAACATCAAGTTACCACAGCGGCTCAAACAGTGCAGCTATGTGCAGGCCCTCCATTTATAGCCGCCGGTGGTGGTGGTGGTCAACCACCGTTTGTTTTACCAACCCACATTCCCATTTCCCAACCGCCTTACCCTGTGATGCGCCCGATTTCCATCCCTGGATCAAACGGCTTCTTAGTATCAAAATTCTCTTGA 1392 44.61 MGCRNRGDEAADEEQERRRSHPSSFVNDALLLTTMCLIGMSVDVHIKDGSVYSGIFHTACVDDRYAIVLKRAKMIKKGSCNSNVANEEVIATLVIQSEDLVQVVAKKVILPADGVAGHETGDVTGAVACSFPCNGTPSTEANKTTSSQSNVGQPHTNQTRCSSGNENGFANGSRPENANHSTNALEVKNADMRGSTKKGGLTDSDDNRKNANHTSSSEPVVSSSATNETVSAKISNSNRTTKEFKLNPGAKIFSPSFPNKRSSTPPAMAMTAGANLAYIPDSYPGIPVASPQPEVEISPFATRSLPIKFLPYGGNDVPHPPPVVGYMTNRSQPVRYVGPYHPIQTPPPYVQPSSQNVMVGRLGPVVYVHPVSQDMVPHTNGFSQVSTCNILTPQQVHVPKHQVTTAAQTVQLCAGPPFIAAGGGGGQPPFVLPTHIPISQPPYPVMRPISIPGSNGFLVSKFS 463
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00793 463 MobiDBLite consensus disorder prediction 1 21 - -
Pdy4g00793 463 Pfam Ataxin 2 SM domain 27 106 IPR025852 -
Pdy4g00793 463 MobiDBLite consensus disorder prediction 138 189 - -
Pdy4g00793 463 MobiDBLite consensus disorder prediction 198 212 - -
Pdy4g00793 463 MobiDBLite consensus disorder prediction 213 241 - -
Pdy4g00793 463 MobiDBLite consensus disorder prediction 138 241 - -
Pdy4g00793 463 PANTHER ATAXIN 2-RELATED 144 428 IPR045117 GO:0003723(InterPro)|GO:0003729(PANTHER)|GO:0010494(PANTHER)|GO:0034063(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00793 - -