AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00794 ATGGACACGGTGAACCAAGAAGTCAGGCCCGATGCCTCACTAATTGTTCCTGAAAAGAGAAAACGTGGCCGCCCACGAAAGGATCCAAGTGAAAAGCGAGCACAAAAGGCGGCACGTGCACAAGCTGCTGGTCGCACGCCTCCTGGTTTTATGCAAGAGAAAAAAACACCTCGAGTTGATCTAATCAATGATCCAACTCAAGTGATGATTGGACAGATTGTCACTGGTGTTGTCGAGGCAACTTTTGATGCTGGTTACCTGCTTGCAGTTAGAATCGGGAACTCAAATATCACATTAAGAGGTGCAGTTTTCAAACCAGGACAGACTGCCCCCGTGACACCTGAAAATGATGTCGCGCCTCATGTTGAAATGATCAAAAGAACCGAAATCCCGTTCCCAGCAGAACTTCAGCCTAAACGTAGGCGTAAACGAAGATCAAAAGAGAAAAATTTGCAGCTTGTTACTTATGTCGGGAATGGGGGTGACCCAGGGCTTTCAAATTCACCATCTAAAAGCAGCTATGGTTTAGCCCCCTCACTCCCACAAGTTGGTGCGCGAGGCAACGTGGTCCCTGTTGTTCTTCAACCAATTAACCTATCAAACGGTTTATCAACCAATCAACCTCCTCCTCATTTGAGGGCCTCACATGGCAAACCGGTGCACTCAGTCCTCCCCTTGGCCGTTTACCCACCGAATGGTTCAACAAGCCAAGCATCAGAGTCACAAACTAGCTCCCAGTTTACGGCTACACCCACTGGGTCTGGAAACGAAAATGCTCCTTTTAAACACGTGGAAGGGGCTAAGCCAGTAAAACCAAATAATGTGCAGGATCCAGTTGTGAAACAAGAATCAGATATTGGTGACATGAATGAGCCTCTTTTTGTTGAACCCCTGCAAACTCGACACTCGGTTCATCATTTCCAACACCCGCCTGTTTTGGGAGGTGTGATGCATAGTGGAACTGGTAGAATGACAGAGCTATTACAGGCTGTTCAGCAGAATATGGGTGATGACCAGGTACCTCGCAATGGACACCCAACAGCAACTTACAATGATAAAACTGGTCAGGCAGGAAGGATGTAA 1083 47.37 MDTVNQEVRPDASLIVPEKRKRGRPRKDPSEKRAQKAARAQAAGRTPPGFMQEKKTPRVDLINDPTQVMIGQIVTGVVEATFDAGYLLAVRIGNSNITLRGAVFKPGQTAPVTPENDVAPHVEMIKRTEIPFPAELQPKRRRKRRSKEKNLQLVTYVGNGGDPGLSNSPSKSSYGLAPSLPQVGARGNVVPVVLQPINLSNGLSTNQPPPHLRASHGKPVHSVLPLAVYPPNGSTSQASESQTSSQFTATPTGSGNENAPFKHVEGAKPVKPNNVQDPVVKQESDIGDMNEPLFVEPLQTRHSVHHFQHPPVLGGVMHSGTGRMTELLQAVQQNMGDDQVPRNGHPTATYNDKTGQAGRM 360
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00794 360 MobiDBLite consensus disorder prediction 1 53 - -
Pdy4g00794 360 MobiDBLite consensus disorder prediction 155 178 - -
Pdy4g00794 360 MobiDBLite consensus disorder prediction 229 257 - -
Pdy4g00794 360 MobiDBLite consensus disorder prediction 337 354 - -
Pdy4g00794 360 MobiDBLite consensus disorder prediction 229 275 - -
Pdy4g00794 360 MobiDBLite consensus disorder prediction 13 35 - -
Pdy4g00794 360 MobiDBLite consensus disorder prediction 161 177 - -
Pdy4g00794 360 MobiDBLite consensus disorder prediction 337 360 - -
Pdy4g00794 360 PANTHER AT HOOK MOTIF-CONTAINING PROTEIN 1 349 IPR045881 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00794 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
4105605 Pdy Pdy1g02179 Pdy-Chr1:64723748 Pdy4g00794 Pdy-Chr4:14106133
4136433 Pdy Pdy4g00794 Pdy-Chr4:14106133 Pdy2g01860 Pdy-Chr2:45864293