AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00798 ATGGCTGATTTTACAGCACCTTCATTCTCTTTAGGTCTTGATTGTGACTTATTCGATTCGGAGACTCCAATCACTCTCGTAAGTCAACATATAGATCCTTCTTCGTCAAATAAATCATCCATACCTGATGTAAAACTCCAAGACACCGATGACGACTTTGAAACCCTAATTGTCGATGATTCGGAGCCTGAATCTGCTGATGTAAATTATCCGAAGCTGAAGCGCCTCCGCCGCGGACCCACCATTGATGCTACATCGTCATCGTGTTCGGTCAAGGCTGATGTGGAGTTGGTTACAGATGTTCATGAGCCAGTTTCAACTAGCTGCAATAATCTGGTGTATCCGGAGTTAACTGTCTGTCCTCTTAGAAGATCTCGGTTGCTTGCTTCTGATCATTATTCTATCAGTGGCGATGGTAATAATAGAAAAAATAACAGATCAGAGTCATATTTACATCAGGGCCAGTCTGATCTTCCAGATTTAGGTTTAAGCAAGCAAAGAAAAGCAAGTCATTCAGTTGACTTATCATCTAGAGGCAATCCAAGGGAAGATCTCAGATCAGAGAAGAGCGTCTGTATCCCTGCAATCGCCATGGGAATGATCTGTGAAGAAATTAGCTTACCCATGAAACTTAAAAGTAACACCATACAAACTAACCAATATGGCCATGTTACACAAAGTTACTCAAATTTGGATGCCTCTCTTCCCCCTGCCCATCACTACTTTTTTCATGATGATCCAAGGATCCAAGAACTTGTTCGAAATCGCCTACCTAATTTTTCTCCTTTGGATAACGTGTCAATTACAGAGCTTGAGCAGCCCAGTACATCAAAGATCGATTACATGGGGCAATTTAGTTGTGCTGAAAGCTCAATTAAAGACAAGAAAAGCTCAACTAACAGGAAAAATCCTAGAGGAACAAAGACTGAAGAAAGATTACAAGGTTGGGTGAATCCAAAACTTGGTGTTGATAAAGGGACAAAAAAACAAGGTGCAGCAGGAAAGGTTCATACAGCCCGCAAAACTGCTGGGCATTGGTTAACAAGCCCTGGTGGAAAGAAAGTTTATGTTGGTAAAAACAGACAGGAATTGACTGGCCGAGTTGCATACATGCAGTACAAAAAGGAGAATGGAGGGAGGTTTACAAAAGCAAAGAAGAAATCTTCTAGGAAGAAGAAGCAATGA 1185 41.35 MADFTAPSFSLGLDCDLFDSETPITLVSQHIDPSSSNKSSIPDVKLQDTDDDFETLIVDDSEPESADVNYPKLKRLRRGPTIDATSSSCSVKADVELVTDVHEPVSTSCNNLVYPELTVCPLRRSRLLASDHYSISGDGNNRKNNRSESYLHQGQSDLPDLGLSKQRKASHSVDLSSRGNPREDLRSEKSVCIPAIAMGMICEEISLPMKLKSNTIQTNQYGHVTQSYSNLDASLPPAHHYFFHDDPRIQELVRNRLPNFSPLDNVSITELEQPSTSKIDYMGQFSCAESSIKDKKSSTNRKNPRGTKTEERLQGWVNPKLGVDKGTKKQGAAGKVHTARKTAGHWLTSPGGKKVYVGKNRQELTGRVAYMQYKKENGGRFTKAKKKSSRKKKQ 394
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00798 394 MobiDBLite consensus disorder prediction 134 154 - -
Pdy4g00798 394 MobiDBLite consensus disorder prediction 375 394 - -
Pdy4g00798 394 MobiDBLite consensus disorder prediction 294 309 - -
Pdy4g00798 394 MobiDBLite consensus disorder prediction 290 340 - -
Pdy4g00798 394 PANTHER RHO GTPASE-ACTIVATING PROTEIN 1 91 - -
Pdy4g00798 394 MobiDBLite consensus disorder prediction 133 186 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00798 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
132719 Pdy4g00798 Pdy9g02048
132720 Pdy4g00798 Pdy9g02191
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
4191174 Pdy Pdy4g00798 Pdy-Chr4:14146309 Pdy9g02048 Pdy-Chr9:44190747