Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pdy4g00810 | ATGGCCAAAAGCTCCTTCAAACTGGAACACCCTCTGGAGAGGCGCCAAGCTGAGGCTGCTCGTATCAGGGAAAAGTATCCTGACAGAGTTCCGGTTATCGTGGAGAAGGCTGAAAGAACCGACATACCTGACATAGACAAGAAAAAATATCTGGTACCTGCTGATTTGACAGTTGGGCAATTTGTGTATGTGGTAAGAAAAAGGATTAAGCTGAGTGCTGAAAAGGCTATTTTTATCTTTGTGAAGAATGTTCTGCCACCAACTGCTGCCATGATGGCTGCGATCTATGAAGAAAACAAAGACGAGGATGGTTTCCTATACATGACATACAGTGGAGAGAATACGTTTGGAATACTTTGA | 360 | 43.61 | MAKSSFKLEHPLERRQAEAARIREKYPDRVPVIVEKAERTDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNVLPPTAAMMAAIYEENKDEDGFLYMTYSGENTFGIL | 119 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pdy4g00810 | 119 | Gene3D | - | 1 | 118 | - | - | |
| Pdy4g00810 | 119 | SUPERFAMILY | Ubiquitin-like | 3 | 117 | IPR029071 | - | |
| Pdy4g00810 | 119 | PANTHER | MICROTUBULE-ASSOCIATED PROTEINS 1A-1B LIGHT CHAIN 3-RELATED | 3 | 117 | IPR004241 | GO:0006995(PANTHER) | |
| Pdy4g00810 | 119 | CDD | Ubl-ATG8 | 12 | 114 | - | - | |
| Pdy4g00810 | 119 | FunFam | Autophagy-related protein | 1 | 117 | - | - | |
| Pdy4g00810 | 119 | Pfam | Autophagy protein Atg8 ubiquitin like | 14 | 117 | IPR004241 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pdy4g00810 | K08341 | GABA(A) receptor-associated protein |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 132018 | Pdy3g00422 | Pdy4g00810 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 4115470 | Pdy | Pdy3g04947 | Pdy-Chr3:115727152 | Pdy4g00810 | Pdy-Chr4:14329711 | |
| 4134786 | Pdy | Pdy2g01257 | Pdy-Chr2:22063005 | Pdy4g00810 | Pdy-Chr4:14329711 | |
| 4137425 | Pdy | Pdy5g02047 | Pdy-Chr5:65849383 | Pdy4g00810 | Pdy-Chr4:14329711 | |
| 4140740 | Pdy | Pdy4g04524 | Pdy-Chr4:97767813 | Pdy4g00810 | Pdy-Chr4:14329711 | |
| 4174981 | Pdy | Pdy3g00422 | Pdy-Chr3:7764255 | Pdy4g00810 | Pdy-Chr4:14329711 |