Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pdy4g00833 | ATGGACAGCGGAGCGGCGAAGACGGTGGTGCATCCAGCAGTCGAATCTCTGTCATATCTTATCGGAACTTGGAGAGGTCAAGGAGAAGGTGGTTTCCCCACCATATCCTCCTTCGCTTACGGCGAAGAACTCAATTTCACTCACCCCGGAAACAAGCCAGTAATAGCTTATTCTCAGAAGACTTGGAAACTGAGTTCTGGAGAGCCAATGCATGCTGAGAGCGGCTATTGGAGGCCAAAGCCTGATGGAACAATTGAGGTCGTCATCGCACAAAGCACTGGTCTTGTTGAAGTTCAGAATGGAACTTATGATGCAGACAAGAAAGTGGTGAAGCTTCAGAGTGAGCTTGTTGGAAACGCTTCAAAGGTTAAAGAGATATCTCGAGTTTTCACTCTGGTTAATGAAGAATTATCTTACGTGGTTGAGATGGCTACCAATGTCACCACTCGTCAGCCACATCTGAAGGCGTCACTTAAAAAGCTCTGA | 486 | 46.91 | MDSGAAKTVVHPAVESLSYLIGTWRGQGEGGFPTISSFAYGEELNFTHPGNKPVIAYSQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQNGTYDADKKVVKLQSELVGNASKVKEISRVFTLVNEELSYVVEMATNVTTRQPHLKASLKKL | 161 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pdy4g00833 | 161 | SUPERFAMILY | Lipocalins | 10 | 160 | IPR012674 | - | |
| Pdy4g00833 | 161 | Gene3D | - | 9 | 161 | IPR012674 | - | |
| Pdy4g00833 | 161 | Pfam | THAP4-like, heme-binding beta-barrel domain | 14 | 160 | IPR014878 | - | |
| Pdy4g00833 | 161 | PANTHER | THAP4 PROTEIN | 5 | 161 | IPR045165 | - | |
| Pdy4g00833 | 161 | CDD | lipocalin-heme-bd-THAP4-like | 14 | 160 | IPR014878 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pdy4g00833 | K23205 | THAP domain-containing protein 4 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pdy | Pdy-Chr4:14760859 | Pdy4g00835 | Pdy-Chr4:14799278 | proximal |