AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00849 ATGCCTTTTACAGTTATCCCTAATCTATCTCCTCCCACTTTTACTCGTCTTCATCATTCTCAATCCTCACATAAATCTCCAATCTCTTCTTCTTCATCTTCTTCATCTCATTCCGCAATTCACCATACCCATGGCGCTCTTCCTCTACAATCATTATCATCCGTCGAATCGCCGCCGGTTCGTGTTAGGGTTTCTCCGCCGCCCGATCCTCGCCAGGATTTTTACGTCAATCTCGGCCTGGCCGTTCGCACTCTCCGCCATGACCTGCCTCTCATCTTCTCCACAGATCTTAATTACGAAATTTACAGAGACGATATCACCTTCGTTGATCCCCTCAACAAGTTCACTGGTATCGACAATTACAAGCTTATCTTCAGAGCATTACGTTTCCATGGTCGAATCCTATTCAAAGAAATCTCCCTGGAGATTTTTAGGGTTTGGCAGCCTTCAGAGAACCTAATTTTGATCCGATGGAACCTCAAGGGGGTCCCTCGAGTCCCCTGGGAAGCCAAGGGCGAGTTTCAGGGCACTTCCCGTTACAAATTGGATCGAAATGGCAAGATTTACGAGCATAAAGTTGATAATCTAGCTTTCAATTTCCCACTACAGCTCAGACCAGCTGTATCTGTTCTTGATCTGGTGGCTGTTTCTCCTGCCACACCTAACCCTACATTCTCATGGAACACTTTCGACTCAAGCTACTCGTCTTCATGGCTAGACTTTTATCGTGCGGTTAAGAACACCTTGGATCCTGGCCAAGATTTTTCGGCTTTACAAGACTGCCAGCTAGTTGCTGCTACTTGTTTATAG 810 46.05 MPFTVIPNLSPPTFTRLHHSQSSHKSPISSSSSSSSHSAIHHTHGALPLQSLSSVESPPVRVRVSPPPDPRQDFYVNLGLAVRTLRHDLPLIFSTDLNYEIYRDDITFVDPLNKFTGIDNYKLIFRALRFHGRILFKEISLEIFRVWQPSENLILIRWNLKGVPRVPWEAKGEFQGTSRYKLDRNGKIYEHKVDNLAFNFPLQLRPAVSVLDLVAVSPATPNPTFSWNTFDSSYSSSWLDFYRAVKNTLDPGQDFSALQDCQLVAATCL 269
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00849 269 PANTHER RIKEN CDNA 2310061I04 GENE 26 214 IPR018790 -
Pdy4g00849 269 MobiDBLite consensus disorder prediction 8 40 - -
Pdy4g00849 269 MobiDBLite consensus disorder prediction 1 40 - -
Pdy4g00849 269 Pfam Uncharacterized conserved protein (DUF2358) 81 191 IPR018790 -
Pdy4g00849 269 SUPERFAMILY NTF2-like 96 192 IPR032710 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00849 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pdy Pdy-Chr4:15314735 Pdy9g03266 Pdy-Chr9:59306784 dispersed