AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00955 ATGTTGGAAAGCAGATTGATTACGATTATAAGGAGGAGCAAATCTATCAATCAGATAAGATCTACGATCTCGTCTCATGGTGGATCGACAAATGTTTACAGTCGATTCTCTTTGGATCGTTATTCAACTTACAAGCATGTTGCTAACCCCGCCGTTAGAAGCTTTTTCATCAATGGTTTTCGATCCTTGCACAATCTCAACAAGGGCTCCTACAAGCCATCTTTTAAATATATGTCCACTGTGGCTGCAACTGCTTTCAAGGAAAATAAGGAAACAATGAAGCTTCTTGTTACTGCTGGACCTCATGCTCAGAAAGCAATTGGAATATGGCTTTTTGCATCTGCTGCATGGGTCTTCAGTATGGTTATTCTTGGTGGTGTTACACGACTTACACGGTCTGGTCTTTCAATGACTGACTGGAAGTTCACTGGCAGCCTTCCTCCTCTATCAGATGAAGATTGGCTGATTGAGTTTGAGAAATATAAACAATCTCCGGAGTTCAAGCGTGTGAACAGAGGAATGAACATAGATGACTTTAAGTTCATTTATTGGATGGAATATGCACATCGTATGTGGGGAAGGGCACTGGGGGTCATGTTTGCTCTACCATTTTCATATTTTATTCGAAAGGGTTACATTAATCTACGGCTTGGAGTTAGACTCGCTGGTCTGTTTGCTCTCGGTGGTGGACAAGGGATGATTGGTTGGTGGATGGTCAAAAGTGGTCTAGAAGAACCACCCTCAGAATACTCTCAACCAAGAGTAAGCCCATATCGTCTTGCTGCCCACCTGACTTCAGCTTTTGCTATATACTGTGGACTCTTCTGGACTGCTCTTTCTGTTGTCATGCCTGAACCTCCTACCGAGTCACTAACTTGGGTCAAAGGGGCTGCAAAAGTCAAACGGTTTGCTGTTCCGGTTGGTATCATTGTTGGTATAACTGCTGTCTCAGGAGCCTTTGTTGCAGGAAATGATGCAGGACATGCCTTTAATACATTTCCAAAGATGGGTGATTCATGGATCCCTGAAGACGTTTTGAGTATGAAGCCACTTATCCGTAACTTCTTTGAGAACACAGCAACTGTGCAGCTTGATCATCGTATACTCGCAACTGCAACCCTAGCATCAATTGGTGGTCTATGGTGGTCGACAAGGAAACTTGACCTACATCCTGCTATTCGTTCTTTGATTGGAAGCACCTTGGGTATGGCTGCTCTCCAGGTTACTTTAGGCGTTTCAACTCTTCTATCTTATGTGCCCGTTTCACTTGGCACGGCCCACCAAGCTGGGGCCTTGACCCTTCTAACCCTGATGCTTCTTCTCAATCACACCTTGCGCCGACCATCACCTATGCTTCTAAAATCTCTGCCTGCAGTTGCAAAGACCATTTAG 1392 44.4 MLESRLITIIRRSKSINQIRSTISSHGGSTNVYSRFSLDRYSTYKHVANPAVRSFFINGFRSLHNLNKGSYKPSFKYMSTVAATAFKENKETMKLLVTAGPHAQKAIGIWLFASAAWVFSMVILGGVTRLTRSGLSMTDWKFTGSLPPLSDEDWLIEFEKYKQSPEFKRVNRGMNIDDFKFIYWMEYAHRMWGRALGVMFALPFSYFIRKGYINLRLGVRLAGLFALGGGQGMIGWWMVKSGLEEPPSEYSQPRVSPYRLAAHLTSAFAIYCGLFWTALSVVMPEPPTESLTWVKGAAKVKRFAVPVGIIVGITAVSGAFVAGNDAGHAFNTFPKMGDSWIPEDVLSMKPLIRNFFENTATVQLDHRILATATLASIGGLWWSTRKLDLHPAIRSLIGSTLGMAALQVTLGVSTLLSYVPVSLGTAHQAGALTLLTLMLLLNHTLRRPSPMLLKSLPAVAKTI 463
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00955 463 PANTHER CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15 73 461 IPR023754 GO:0005743(PANTHER)|GO:0006784(PANTHER)|GO:0006784(InterPro)|GO:0016020(InterPro)|GO:0016653(PANTHER)|GO:0016653(InterPro)
Pdy4g00955 463 Hamap Heme A synthase [ctaA]. 104 448 IPR023754 GO:0006784(InterPro)|GO:0016020(InterPro)|GO:0016653(InterPro)
Pdy4g00955 463 Pfam Cytochrome oxidase assembly protein 109 438 IPR003780 GO:0006784(InterPro)|GO:0016020(InterPro)|GO:0016653(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00955 K02259 heme a synthase [EC:1.17.99.9]