Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pdy4g00965 | ATGGCGGATTTCACATGGATGCTTCACCAACAATCATCAAATCAAGTCGACCAAGTAAAATGGGCTAAACATTATAACTCCAATCATCAGATACTACTGGTAGGGGAAGGAGATTTCTCCTTTTCTCTTAGTCTGGCAATGGCGTTTGGTGATGCTTATAACATTGTAGCTACTTCTTTGGATTCTTATGATACTTTGATCGAGAAATACCAAAGTGCAAAATCAAACTTGGAACTCTTGACTATGTATGGAGCCAAGTTGTTACACGGGGTTGATGTGTCGAAAATGAAATTTCATACTGATCTTGTAATGCCAAAGTTTGATCGAATTATATACAATTTTCCACATGCCGGTTTTCAGGGGCGTGAAGATGATCCACAAGTAATCATGATGCATAAAAATCTGGTTTTTAGTTTTTTTGAGAATGCAAGTGGCATGTTGTGTGCAAACGGTGAAGTGCATGTAACACACAAGACTACAAGCCCGAACCAATGTTGGCATATTGAAAAACTCGCGGCTAAAAATTCTTTAGCCTTACTTGAACGGGTCGAGTTCAAACTTGAAGATTATCCCGGTTATAATAACAAAAGAGGAGATGGAAAGAGCCCTGACAGGGCGTTTCCTTTAGGAGAGTGCAGTACTTACAAGTTTATACTGTCTTCAGCAACTACAACTCCTTATCAACCCATTTCTTTATCACATAGAGCGAATGCGAGCCTGAACCATTCTCCTGTAATCAACTATTCTGAGCGTTCTCAGATCTTCAGGGAGTCTTTTCATCACACAGAATCGACAAATGGACGTGCTGATAATTTTTTGAAAGAGCTTCGTTATCAGAGAAATCGTTTGCTAGTACGCGCTTATGGGTATCAGTGGTAG | 879 | 39.7 | MADFTWMLHQQSSNQVDQVKWAKHYNSNHQILLVGEGDFSFSLSLAMAFGDAYNIVATSLDSYDTLIEKYQSAKSNLELLTMYGAKLLHGVDVSKMKFHTDLVMPKFDRIIYNFPHAGFQGREDDPQVIMMHKNLVFSFFENASGMLCANGEVHVTHKTTSPNQCWHIEKLAAKNSLALLERVEFKLEDYPGYNNKRGDGKSPDRAFPLGECSTYKFILSSATTTPYQPISLSHRANASLNHSPVINYSERSQIFRESFHHTESTNGRADNFLKELRYQRNRLLVRAYGYQW | 292 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pdy4g00965 | 292 | PANTHER | PHENYLALANYL-TRNA SYNTHETASE | 13 | 198 | - | GO:0005737(PANTHER)|GO:0070042(PANTHER)|GO:0070475(PANTHER) | |
| Pdy4g00965 | 292 | FunFam | Os09g0479300 protein | 29 | 180 | - | - | |
| Pdy4g00965 | 292 | Pfam | rRNA (uridine-N3-)-methyltransferase BTM5-like | 32 | 197 | IPR019446 | GO:0070042(InterPro)|GO:0070475(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pdy4g00965 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pdy | Pdy-Chr4:18158556 | Pdy4g00968 | Pdy-Chr4:18229759 | dispersed | |
| Pdy | Pdy-Chr4:18146455 | Pdy4g00965 | Pdy-Chr4:18158556 | tandem | |
| Pdy | Pdy-Chr4:18158556 | Pdy4g00966 | Pdy-Chr4:18180258 | tandem |