Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pdy4g00967 | ATGGCGGATATCACTCTGAAGCATGAGCAAATAATCTCCATTGAAGACCACAAACTAACATGGGCTAAACATTATAACTCCAATCATCACATACTACTTGTAGGAGAAGGAGATTTCTCATTTTCTCAGAGTCTGGCAATGGCGTTTGGTTCTGCTTCTAACATTGTAGCTACTTCTTTGGATTCTCACGATGTTCTGATCAAGAAATACCAAAGAGCACAATCAAACTTGGAAATCTTGACTAATTATGGAGCAAAGTTGTTACACGGGATCAATGTGATGGAAACAATACTTAATACTGATCTTCAAACGCGAAAGTTTGATAGGATTATATACAATTTTCCACATGCCGGTTTTCTGGGGTTGGAAGATGATCCAGTTGTAATCATGGCACATAGAAATCTGGTTTTTAATTTTTTTAAGATTGCAAGTGGCATGTTGCGTGTAAGCGGTGAAGTACATGTGAGACACAAGACCACATACCCGTTCCAATGTTGGTATATTGAAGAACTCGCGGCTCAAAATTCTTTAGCCTTACTTGAACGTGTCAAGTTCAAACTTAAAGATTATCCCGGTTACAACAACAAAAGAGGAGCTGGAAAGGACGCTGATAAGCCCTTTCCTTTAGGGGAGTGCAGTACTTTCAAGTTCATATTGTCTTCAGCAACCAAGAAATCAACTAAAAATCCTTATCAACCCGAAACTTTTTTATCACAAAGAGCAAATGCGAGCCTGGTTATGAATCATGCTCCTGTACTATATTATTCTGAGTGCCCTCGGATCTTTAGGGAGTATTTTCATCACGCAGAATCGACATATGGACAGGTTGATAACTATCTTTCCTATTCTGTTCCATATATGCTGGGAATTGGGTTTGAAAGATGCAAAGCTGAAGATCGTGTGAATTTCTCGAGCAATTACATAAATCTTTTGAAAGAGCTTCAGGGTCTGAGTATACGCAGGATAGAGCTTCTGAGAAACCAAATGCTAGAACTCGATCATGGGTACCGCTTATAG | 1017 | 39.13 | MADITLKHEQIISIEDHKLTWAKHYNSNHHILLVGEGDFSFSQSLAMAFGSASNIVATSLDSHDVLIKKYQRAQSNLEILTNYGAKLLHGINVMETILNTDLQTRKFDRIIYNFPHAGFLGLEDDPVVIMAHRNLVFNFFKIASGMLRVSGEVHVRHKTTYPFQCWYIEELAAQNSLALLERVKFKLKDYPGYNNKRGAGKDADKPFPLGECSTFKFILSSATKKSTKNPYQPETFLSQRANASLVMNHAPVLYYSECPRIFREYFHHAESTYGQVDNYLSYSVPYMLGIGFERCKAEDRVNFSSNYINLLKELQGLSIRRIELLRNQMLELDHGYRL | 338 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pdy4g00967 | 338 | Pfam | rRNA (uridine-N3-)-methyltransferase BTM5-like | 32 | 197 | IPR019446 | GO:0070042(InterPro)|GO:0070475(InterPro) | |
| Pdy4g00967 | 338 | PANTHER | PHENYLALANYL-TRNA SYNTHETASE | 21 | 209 | - | GO:0005737(PANTHER)|GO:0070042(PANTHER)|GO:0070475(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pdy4g00967 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pdy | Pdy-Chr4:18207118 | Pdy4g01745 | Pdy-Chr4:48606863 | dispersed | |
| Pdy | Pdy-Chr4:18180258 | Pdy4g00967 | Pdy-Chr4:18207118 | tandem | |
| Pdy | Pdy-Chr4:18207118 | Pdy4g00968 | Pdy-Chr4:18229759 | tandem |