AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00973 ATGGCGATTGTCGCGGGAAAATTCATATATGTCAAAGCATTTGAGCTTCAGTCCCGAGTGTTTCTAAATCCTCGGCCGGTGAAGATTATAGTTCGATGCTGTTCGAATTCGGGAGAAAGCTCTACGGATTTCCCAGTGAGGTACGTTCCCAGGAAATCTTCAAAATGGAATAAACTTAACGATTCTACCCCGGTTTCAAAGGAATCCGAGAACTTAAAATCGTGCCGATTCACAGACTCTGATTCGTCGGATCTTAAGTCAGGTAATTCACGATCAAAAGAAAAGAAAATTCGTAATTCAGCTGGGAGATTAGAGGTGAGTGAACAAGGTTATAGATGGAGAATTGTGGAGTCAAAGTGTGAAGAAGAACTTCACGAATTTGATGCTGATGAAGGTCCGGAGGAGGTTTTAGACGAACTTGAGTCTGATAGTGGAGAATATGAAATTAAACATTTGGCAGTCGAATCTAGTAAAACTGAAGAAGAAGCTGAGAAGATGGCGATTCGGTTGCTTGCTGCAAGAGCATATACAGCACTCGAGCTGAAGAAGAAATTGCTAGGAAAGAAGTTCTCCCTTGAAGTTGTCAATGCTGTGATTTCTGACTTCCAAAACAGAGGGTTGATCAATGATTCCTTGTACGCTGAAGCATTCTCCCGATCAAGATGGTCTTCATCAAGTTGGGGTCCACTTAGAATCAAACAAGCCTTGGCAAAAAAGGGTGTCAATGATTCCGATGCGCATAAAGCAATAAAATTGGTTTTAGAGGACGGTGAACCCAGTGATGATCAACTTTCAAGATTTGGATTGTCAAAGCCCTCGATGGACCATCTATTTTCCCAAGCTTCAAAGCAATGGCTTCGTGCTAAAGATCTCCCCGTTGAAAAGCAAAAATCAAGAATCATCTCATGGCTTCAATATCGTGGCTTTAATTGGGGAATTATCACCTACATCTTGAAAAAGTTACAATCAGAGCACCCTCCTTAG 984 41.67 MAIVAGKFIYVKAFELQSRVFLNPRPVKIIVRCCSNSGESSTDFPVRYVPRKSSKWNKLNDSTPVSKESENLKSCRFTDSDSSDLKSGNSRSKEKKIRNSAGRLEVSEQGYRWRIVESKCEEELHEFDADEGPEEVLDELESDSGEYEIKHLAVESSKTEEEAEKMAIRLLAARAYTALELKKKLLGKKFSLEVVNAVISDFQNRGLINDSLYAEAFSRSRWSSSSWGPLRIKQALAKKGVNDSDAHKAIKLVLEDGEPSDDQLSRFGLSKPSMDHLFSQASKQWLRAKDLPVEKQKSRIISWLQYRGFNWGIITYILKKLQSEHPP 327
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00973 327 MobiDBLite consensus disorder prediction 72 101 - -
Pdy4g00973 327 PANTHER REGULATORY PROTEIN RECX FAMILY PROTEIN 13 326 IPR003783 GO:0006282(InterPro)
Pdy4g00973 327 MobiDBLite consensus disorder prediction 59 101 - -
Pdy4g00973 327 Pfam RecX, second three-helix domain 209 249 IPR053924 -
Pdy4g00973 327 Gene3D - 209 252 IPR036388 -
Pdy4g00973 327 Gene3D - 272 326 IPR036388 -
Pdy4g00973 327 Pfam RecX, third three-helix domain 275 318 IPR053925 -
Pdy4g00973 327 Hamap Regulatory protein RecX [recX]. 132 325 IPR003783 GO:0006282(InterPro)
Pdy4g00973 327 Pfam RecX, first three-helix domain 166 200 IPR053926 -
Pdy4g00973 327 Gene3D - 162 207 IPR036388 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00973 K03565 regulatory protein