AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00982 ATGGAAGAATCGCAGGAGATTTTGTTGAACTCGCTGGCAAACGTCGGAGTTCCGATCCCGCAGGAGGTTTCGTCAGTTGAAGATCTAACACCGGAATCCTTGGTTACGATATGTGCTCATTCTCTTCGCATTATTTCGAACTCGGAATCCTTTCCGATCACTTTACCGGAATCTATGGCCGATCGTTTCAAATTTTGCACCGATCTTGCTTCATCCGTCAAAGACCTAGGTTACATCGGCGACATTAGCTTTCATAAGTTCCTGTATCCATCCGAAGAAGACATGTATAAGTTGATAAGGTTTTTGGTTGGGAGGCTCTCTGAATCATCTAGGATTGCAGTATCACCTGAAACAAAGGAAAATAGTGCAAATGCAACAACAAATATAGATAAATTAGAAAGATCTTCCAAGGATTCTGGCGATGAGGGATGTGATTTGCATACTAACGTTGAAGACATGAAACCGAAAATTGAAGAAGTGGTGTCAAATTCAATCCAGTATGCTGAAGATTTTGCAGCTGATAATGGTAGAGGGAATTCAGAAACTATTAATGTTGGATTAAGTAGTATGGAAAATGGCAAAGCTTTAAATGATGATACTCGGACTACAACAGATACTGGTGGTGGCAAGGGAGGGGTTAAAATTCAGGAAGATGGTCAACATAAACTTGAGCAGGCACCATTGTCTGACAAATCATCCCAGACGAGTGACATGACCAACATTTCAATAAATAAAAAATACGTGCTTCCGGATGAAGTAAGTTCAGAATCATTGGAGTTGCAACAACTGGAAGAGCAACACTGTTTGTTGAAAACTGCAGTGGAAATGGCTTGTGATGAACAAACCCCTTTGGATTCATTCATCGCTCAGCTCAACAAACAAATAGATGCAAAAAGGCATAATCTTGTGGAACTTGAGTCAAAATGGAAAGCCATCATAAAGCCTTTGGAAGAGAAGAAAAGAAATCTTAAAGAAGTATTATGTGCAAAACAACCAGAGTCTCAAGAGAAACTTCAACAATGGAAAAAACTTGAGCAGGACGTGGAGTCTGTATTGTCTGAATCAAACCGAAGGGAGGAGGAACTTTCCAATTTATCAATAGAATTTAAGAAACTGCCCAAATTGGCTACAAGAAGATCCTACATTGAACGTATAAAAGAGATCACTAAGAACAGCCGGAAACAGGACATCGACATAGAGCGTATCTTAAAAGAGACCCGAGAGCTTCAGTTAGAGAGTAACTTGATTCAAGAACGCCTGCATCGAACTTGCACTGTGGTAGATGAAACACTACAGAGGGAAGCAAGGAAGGATCAAGTGGGGGAGCAAGCTCATATTTTGCTGACATCCATCCACGAGAGTTTTGAAGAAATTTCAGAGAAGATCCTAGCAACTGATCGAGCACGTAGAGAAGCAACAGACCTTGAAACTAAGCTTTCAAGTATTTCTGCACGAAGTTTAAACATCGACAAACTACAAGCAGACCTTGATGCCATCAGGAAGGAAAATGAATACCTCGAATCTAGGTCTGTTAATTCTTAA 1542 40.4 MEESQEILLNSLANVGVPIPQEVSSVEDLTPESLVTICAHSLRIISNSESFPITLPESMADRFKFCTDLASSVKDLGYIGDISFHKFLYPSEEDMYKLIRFLVGRLSESSRIAVSPETKENSANATTNIDKLERSSKDSGDEGCDLHTNVEDMKPKIEEVVSNSIQYAEDFAADNGRGNSETINVGLSSMENGKALNDDTRTTTDTGGGKGGVKIQEDGQHKLEQAPLSDKSSQTSDMTNISINKKYVLPDEVSSESLELQQLEEQHCLLKTAVEMACDEQTPLDSFIAQLNKQIDAKRHNLVELESKWKAIIKPLEEKKRNLKEVLCAKQPESQEKLQQWKKLEQDVESVLSESNRREEELSNLSIEFKKLPKLATRRSYIERIKEITKNSRKQDIDIERILKETRELQLESNLIQERLHRTCTVVDETLQREARKDQVGEQAHILLTSIHESFEEISEKILATDRARREATDLETKLSSISARSLNIDKLQADLDAIRKENEYLESRSVNS 513
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00982 513 MobiDBLite consensus disorder prediction 116 130 - -
Pdy4g00982 513 PANTHER JM1 PROTEIN 244 509 IPR008530 GO:0097602(PANTHER)|GO:2000060(PANTHER)
Pdy4g00982 513 MobiDBLite consensus disorder prediction 131 148 - -
Pdy4g00982 513 Pfam CCDC22 protein N-terminal domain 1 107 IPR048349 -
Pdy4g00982 513 Pfam CCDC22 protein coiled-coil region 250 484 IPR048348 -
Pdy4g00982 513 Coils Coil 489 509 - -
Pdy4g00982 513 MobiDBLite consensus disorder prediction 191 209 - -
Pdy4g00982 513 MobiDBLite consensus disorder prediction 116 148 - -
Pdy4g00982 513 Coils Coil 288 308 - -
Pdy4g00982 513 MobiDBLite consensus disorder prediction 191 239 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00982 K23343 coiled-coil domain-containing protein 22