AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g01060 ATGAATGATGAATCAATGAAGATGAACAGCAAATACCTAAAACTCATCATCTTCCTCTTCATCCTCAATTCTATTACTCTTTCCCTCTACTTCTCTTCTCATCCCGATTACTTCCGCCGTCGCCGTTCTTCAACCCAAAACCCTCATCATCAATTCCAATCTCCCTTTTCCGATCACACCCAGCTTCCATCTTTGACTAATTCCAATAAACCCTGGCCGATCTTGCCTTCTTACCTCCCATGGTCTTTAACCCCCAACATCCCTTTTAGATCCTGTGAAGCCTATTTCGGCAATGGGTTTACTCGTCGCATCGATCTTCTCAAGCCGTCGCCGGAGATTTACCGCAAATCACTCAACGGCGGTGGAGGTGGAGGAGGAGGATGGTTTAGGTGCTTTTACAGTCAAACGCTGCGGAGCTCGATTTGCGAGGGCGGGAGGTTGCGGATGCATCCGGAGAAGATTAAGATGTCAACCGGTGGTGAGGTTTTGGAGTCTGTGATTGGTCGGTCGGAGGAGGAAGAGCTGCCGGAGTTTGAACTGGGAGCTTTTGATCTGGAGATTTCTGGGAAATCCAAGAATCATGGTAAGAAGCTTGCTACTGACCGTTTCTTGAATGAGTATTTGCAAAATGGAGGGATCTCAAGACATACAATGCGAGATTTGGTCGATTCAATTCAGTTAGTTGGCGCTAATGATTTTGAATGCTCAGAGTGGGTTGAGGAGCCAACACTTCTGATCACACGTTTCGAGTATGCAAACCTTTTTCACACGGTCACAGATTGGTACAGTGCCTACGTCTCTTCAAGAGTTACCGGCTTGCCAAACAGACCTCAATTGGTTTTCATAGATGGCCATTGCATGACACCGTTGGAAGAAACATGGAAAGCCATGTTCTCGGGTTTAAGATATGCTAAAAACTTCAGCGGGCCCGTTTGCTTTCGTCATGCTATCCTCTCGCCTTTAGGATATGAAACCGCCATGTTTAGGGGTCTCTCTGAAGACATCAATTGTCATGGGGCTCCAGCCCATGAACTATGGCAGAACCCCGATGACAAAAAAACCGCCCGGATCTCAGAATTCGGTGAAATGATCCGATCCGCGTTTTCACTTCCTCTACACCGACAACAACACGGTCCGAGATCCGGGTCTAGAAATCATAACGTCCTTTTTGTGAGGCGAGAGGATTATCTGGCTCACCCCCGCCACGCTGGCAAGATTCAATCGAGGCTTAGCAATGAACAAGAAGTATTTGATGCGTTAAAGAGCTGGTCTTCGAGTCATACTGAATGCAAGATTAATTTAGTGAACGGGCTTTTTGGACATATGTCGATGAAGGAGCAAGTGAGGGCGATTCAAGATGCGTCTGTAATTGTGGGTGCTCACGGAGCGGGACTGACTCATATTGTGTCGGCAACGCCAGAAGCGGAAATATTAGAGATTGTTGCTAGCGCGTTTAGAAGGCCGCATTTTGAACTAATTTCTAAGTGGAAAGGACTAAAGTACCACCCGATATATTTGGGTGGATCGCATGCTAATCCGTCTGTAGTTATCGATAAACTCGGTAATATTTTGAAGAGCATCGGATGCTGA 1590 46.6 MNDESMKMNSKYLKLIIFLFILNSITLSLYFSSHPDYFRRRRSSTQNPHHQFQSPFSDHTQLPSLTNSNKPWPILPSYLPWSLTPNIPFRSCEAYFGNGFTRRIDLLKPSPEIYRKSLNGGGGGGGGWFRCFYSQTLRSSICEGGRLRMHPEKIKMSTGGEVLESVIGRSEEEELPEFELGAFDLEISGKSKNHGKKLATDRFLNEYLQNGGISRHTMRDLVDSIQLVGANDFECSEWVEEPTLLITRFEYANLFHTVTDWYSAYVSSRVTGLPNRPQLVFIDGHCMTPLEETWKAMFSGLRYAKNFSGPVCFRHAILSPLGYETAMFRGLSEDINCHGAPAHELWQNPDDKKTARISEFGEMIRSAFSLPLHRQQHGPRSGSRNHNVLFVRREDYLAHPRHAGKIQSRLSNEQEVFDALKSWSSSHTECKINLVNGLFGHMSMKEQVRAIQDASVIVGAHGAGLTHIVSATPEAEILEIVASAFRRPHFELISKWKGLKYHPIYLGGSHANPSVVIDKLGNILKSIGC 529
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g01060 529 MobiDBLite consensus disorder prediction 47 62 - -
Pdy4g01060 529 Pfam Glycosyltransferase 61 379 477 IPR049625 GO:0016757(InterPro)
Pdy4g01060 529 PANTHER PUTATIVE-RELATED 16 529 IPR007657 GO:0016757(InterPro)
Pdy4g01060 529 MobiDBLite consensus disorder prediction 42 62 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g01060 K03714 glycoprotein 2-beta-D-xylosyltransferase [EC:2.4.2.38]