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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g06395 ATGAAAACGATCAATGTGATGCTAAGAAAATGCAAAACATTATCGAAACAATTATCACGATCGTCATCGAATACGAGTATTGGATCCAAATCCTCTAGACATGATCATCATCATCATAACAACAAAACTAACGGAGGAATTATATGGAACACCAATGCTATCTCCGCTGTCTACGTAAATAACGATAACGGAAGTAAAGAAGAACATCAAGAACTAGTGTTAGTTGGAAGTACGAGGAAACGGTACGTGATTAGCTCAAAGTACTTAATTCATCCGTTAATAAACGCACTAATTGACAAGTCGAAACAGAATAATGAAGATGATGTTTCGGTTATTAATTGTGAAGTTGTGTTGTTTGATCATTTGTTGTGGATGCTAGAGACTAGTGATCTAAATGTTACCTCCGATTGTTTGGATGAACTTGCTGATCTCTACTCATCGTAA 444 35.81 MKTINVMLRKCKTLSKQLSRSSSNTSIGSKSSRHDHHHHNNKTNGGIIWNTNAISAVYVNNDNGSKEEHQELVLVGSTRKRYVISSKYLIHPLINALIDKSKQNNEDDVSVINCEVVLFDHLLWMLETSDLNVTSDCLDELADLYSS 147
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g06395 147 PANTHER EXPRESSED PROTEIN 7 146 IPR052826 -
Pslu1g06395 147 MobiDBLite consensus disorder prediction 15 29 - -
Pslu1g06395 147 MobiDBLite consensus disorder prediction 15 45 - -
Pslu1g06395 147 Pfam Auxin responsive protein 64 126 IPR003676 GO:0009733(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g06395 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:43925699 Pslu3g15921 Pslu-Chr3:114592048 dispersed
Pslu Pslu-Chr1:43895413 Pslu1g06395 Pslu-Chr1:43925699 tandem