AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g06444 ATGATATCCAGTGATGATCATCCACCATCAGATCCTTCATCATCTCATCATCATCAACAACAAGTTTCTCATGATCTAAAGTCTTCTGATATAGATCTGAAGTTTACAGATGCTGATCTTGATGTCACCAACAACCAACTACCAAATTTCACTATAAGGGATTATGTTTTTGGTTTAAGGAGCAAAGATATTGTTACCAATTGGCCTTTTTCTACAACAAGTTTACAACTTTGCTTGAAACATGGAGTCAAGAATTTATTGCCACCTTACCAGTCTCTTGGTTCATTAAGAAACAACTCATCTTTGACCAGATGCAGTCTTGAAAATCGTTTGACCGATGAAGAACTCCTAAATAGTTTTGATGGGAAGCCCACAAACGAATTCAAATCAATGGAAAACCTAGCCTTGGAGTTTGTAACTACAAATTCAAGTGGTTCAAAAGGTCAGAGATCAAAGGTTCAGAAATTCCCATCTCAAAAACCAGTTAATGCTTCTGTTCAAATTAAAAAGAGTAGATTCATAATGAAGTTAAATGCGGGCATTGAACGAGTTGAAGAAGTTGCTCCAAATAATTTCATTGTCTCTGAAACAGTAGCATCTAAAGTTTGTCCAGTTTGCAAGATCTTCTCATCATCATCAAACACGACTCTGAATGCTCACATTGACCAGTGTCTAACCGGGGAAGGGACTATGAGGTGGACTGATAATTCCAAGGTTATAGTCAAACATAAAGTCAAACCTCGGAAGATGAGGTTAATGGTGGATATATACAAAACAGCTCCACATTGTACGATTGAGGAACTCGATAGAAGAAATGGTACAAGCTGGGCTACTAATTCGAGTTTTCCCGCTCAAGAATTTCAGTTTCAAGGTGAAGAGGATAAAGAAGATCCAAAGACGACTATAGTTAATTCCGATGTTGCTGATAACGAAGGTGAGGTGTATATCGACACCGATGGCACAAAAGTTCGGATCTTGTCAGTTCCAAAAGCAGGTTTATCAGATAATCATAGAGCTCAGACTTTAGTAAAAGGAGTCAAAGGGAGTAAAACTATGGCCGGTAAGAAGAAAAACAATAGTCTTTATCAGCAGAAAAATCATCATAAGGTTTTGAAACCTAGCCCTAATGCCAAGAAGTTATGCTCACCAAAGCATCAGGCAAGAAGTGGTCATGAAGAAGATGCTGTCATGGTTAAAAACTGCAGCAGAGAACCATTGAAAGTTACTGATTTGGGTATAATAAGGCCACCATGGGCATGCTCTAAGAGAACTGGTCTTTCGAAAAAGTTAAGTAGCAAGGATAAAAAGATGGAATTGCAACGTCATGAAAGGAAAGATTTTTTTCTTGAAAGTGATAAATTTTCTTCCGAATGTGATTTAGGAATTTCCCGCAACTCATCTAACGAGGCGGTTTCTTCTCAAAGTAAGAAGAAATTGATAGCTTCATTGTCCTTAATCAAGCTGCCTCTTAATAGTAATAAGATGGACTTTAGAAAGGAAGGCAACCGTATGCATGGTGAGGATGAGGATATGGATGAGGATGAGGAAGATGTTGATGATGATGATGAAGATTTTTGTTCTCCAGATGCATGTCAATCACAACATTCTGATAGTCTTGATACTAGACCAAAGGGGGGAAAGTTTTCATCTTTGACCAAGAATCTGTCATTTCCAGCTTCCAAATTCAACTTGAAACGAAATTTTTCAGCTGTTGATAAATCTTGGGTCAAATCTGTTGATGAGTCATCTCAAGACTCTTTAAAAGAACAATATAGAATGGAAGAACAAGTGATTTCTAAGAAGAACGAAGATTTAAGATCCGTTACTTCAAAAAGTTCAAATGGAGATTCTTCGGTGGGGATTCAAGCTGCTAATGTTGACGAATTATGTGATGTAGAATCTGTTGGAAATGAGGCATTATCATCCATCCCAGCTCCTAGTTTCATGGGTTTGAGCAACTCTTTCAAACCGGAAATTTCAAAACAGGAGTGCATTGAGCTGTATCATAATCAGATATGTTCAACTAACCGTGCTCCAAATGATGTTGAAAAACATGAAAATTACTTTCAAGAGGTCGATCCTATACCGATTCCTGGTCCACCCGGATCATTCTTGCCAGCTAGCCCAGGTGGAGATCCGGTTTCTGAAGAACAAATTCAAGAAATTAGGATTCCATCTAGTGAAAACCAGCAACCTCATTATGCCACGGAAAATCAAGATTCTACGTCTAATTCTCCAGTTTCAACGGTCTCTAATTCAAGATCTACTTCTGCACAAGATGATACATATAAAAAAACGTTTTTTGGTATGGGGTTTACAGAAATTGGTTCATTACATAATAGTCTCAAGAATGATCAGCCTTGCTGTTGCTCGAGAAAGGAGGTTGCTTTAAATTACCAAGAATCATTTAATGTAAGGAAACAACCGACTGAATCAAACAGGAGTTTTCCAAGCAGTTTAAACTTCAAATCTGATATGTTTCCACTAAGCAACTACCCAATCTCACCAACGCCTGAAACTGCAAGTTTTCCGACCAGCCAAAGATTCCCGGTTTCTTGTGACCGTGATGTGGCTGTTAGTCCTTCAAAACCCGTTCTTAGGTTAATGGGAAAAAACTTAACCGTAGTTAAGACAGATGACGATGAATTTAGACCTCCACAGTCAAGTCAACAACTTCCTCAATGTCCCGTGATGTTTAGTCAGTACCAAAATGGGTTTGATTCTCAACATTCCAATGCCCATCCATGGAGTATTACAAGAAGCAATGCGGACTTGAGGCCTAATTATGGTGGTTTCATGACACCTATGGATCGTTATTGTCATGATGGTTCTTTTCTGGAGCCCATAGGGTCCCAGGCAAGGTCCCAACATGGTCATAACGTTCTCAATTTTCAAGCAGTAAGTGGAGGAAATGGTTATAATAATTTTCCTATAAATGAAGGTGATGATTATATACGAAATGAATTCTTGAAAAGAAGTCAGGGGCAATCGAATCAGTTATACACAATGTACCCTCCATATGTTGCTGGTGGTGGGTTTCAAACTTCTTTTGGTAATGGTGAATTAAGCAAGTTGAATATTGGATCACTATCATCATCATCATCATCATCATCATCATCATCATCATCATCGTTGTCTTCAACGTCGCATTTGCAACCTTCAAGAGCGTATTATCCTCGTGGCTATCCTTAG 3192 38.44 MISSDDHPPSDPSSSHHHQQQVSHDLKSSDIDLKFTDADLDVTNNQLPNFTIRDYVFGLRSKDIVTNWPFSTTSLQLCLKHGVKNLLPPYQSLGSLRNNSSLTRCSLENRLTDEELLNSFDGKPTNEFKSMENLALEFVTTNSSGSKGQRSKVQKFPSQKPVNASVQIKKSRFIMKLNAGIERVEEVAPNNFIVSETVASKVCPVCKIFSSSSNTTLNAHIDQCLTGEGTMRWTDNSKVIVKHKVKPRKMRLMVDIYKTAPHCTIEELDRRNGTSWATNSSFPAQEFQFQGEEDKEDPKTTIVNSDVADNEGEVYIDTDGTKVRILSVPKAGLSDNHRAQTLVKGVKGSKTMAGKKKNNSLYQQKNHHKVLKPSPNAKKLCSPKHQARSGHEEDAVMVKNCSREPLKVTDLGIIRPPWACSKRTGLSKKLSSKDKKMELQRHERKDFFLESDKFSSECDLGISRNSSNEAVSSQSKKKLIASLSLIKLPLNSNKMDFRKEGNRMHGEDEDMDEDEEDVDDDDEDFCSPDACQSQHSDSLDTRPKGGKFSSLTKNLSFPASKFNLKRNFSAVDKSWVKSVDESSQDSLKEQYRMEEQVISKKNEDLRSVTSKSSNGDSSVGIQAANVDELCDVESVGNEALSSIPAPSFMGLSNSFKPEISKQECIELYHNQICSTNRAPNDVEKHENYFQEVDPIPIPGPPGSFLPASPGGDPVSEEQIQEIRIPSSENQQPHYATENQDSTSNSPVSTVSNSRSTSAQDDTYKKTFFGMGFTEIGSLHNSLKNDQPCCCSRKEVALNYQESFNVRKQPTESNRSFPSSLNFKSDMFPLSNYPISPTPETASFPTSQRFPVSCDRDVAVSPSKPVLRLMGKNLTVVKTDDDEFRPPQSSQQLPQCPVMFSQYQNGFDSQHSNAHPWSITRSNADLRPNYGGFMTPMDRYCHDGSFLEPIGSQARSQHGHNVLNFQAVSGGNGYNNFPINEGDDYIRNEFLKRSQGQSNQLYTMYPPYVAGGGFQTSFGNGELSKLNIGSLSSSSSSSSSSSSSSLSSTSHLQPSRAYYPRGYP 1063
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g06444 1063 MobiDBLite consensus disorder prediction 691 758 - -
Pslu1g06444 1063 MobiDBLite consensus disorder prediction 720 758 - -
Pslu1g06444 1063 Gene3D Classic Zinc Finger 201 227 - -
Pslu1g06444 1063 MobiDBLite consensus disorder prediction 1028 1063 - -
Pslu1g06444 1063 MobiDBLite consensus disorder prediction 1 23 - -
Pslu1g06444 1063 MobiDBLite consensus disorder prediction 507 527 - -
Pslu1g06444 1063 MobiDBLite consensus disorder prediction 496 545 - -
Pslu1g06444 1063 MobiDBLite consensus disorder prediction 529 545 - -
Pslu1g06444 1063 MobiDBLite consensus disorder prediction 1028 1054 - -
Pslu1g06444 1063 PANTHER HAPLESS PROTEIN 1 931 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g06444 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
134413 Pslu1g06444 Pslu2g00423
134414 Pslu1g06444 Pslu3g15944
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:44249298 Pslu2g00423 Pslu-Chr2:2811865 wgd
Pslu Pslu-Chr1:44249298 Pslu3g15944 Pslu-Chr3:114741627 wgd