Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pslu1g06451	ATGACTTCTTTCATATTGAAGATTCTAGAATCTGCGCATCGATTGAATTCAACTAGTTCCAGCTCCACCTCGGCATCCAGTTCCAACAGCTCGATTTCAAGTCATGTAACCGAATCGGATCAGACGGTCGTGTGTTCCTCATCCACCGGAGAATTCGATCGAGTTCCGCTCGACGTGTTTATGCAAATCCTGAAGTTAATTGGACCGAAAGAAGCGGCTAAGCTTACAGTTATTTGTAAATCATGGAAATTGATAGTTTCTGATAATATGTTGTGGATATCTTACCTTCAGAATCAGACAGATCCTTGGGACTCAATGTTTTTCGCAGAAACTAGCTTACGTTCTGGTTATCCTCTTCGAACATATCCTTCTCAGAGGCAATCATTTATGCATATATATGGTCAACGAGCACGAATTCCTGGAGCTATCATCATTGACGGTGGTTCTGGTTATTGCAAATTTGGTTGGAGTAAATACGACTCTCCATCTGGGCGGGCTGCAACATTTTTGGAATTTGGTAATATTGACTCTCCAATGTACTCTAGGCTTCGCCATTTTTTTGCAACAATATATAGCAGGATGCAGGTGAAATCATCTTCACAGCCAACAGTAGTCTCAATTCCAATCTCTCAGTATGGTGATACACAAGATGCTAAAAATGCGAGACGCCAACTAAAAGAAGCCATCTACACGTCAATGTTTGACATGAATGTTCCTTCGGTCTGTGCCATCAGCCAGGCAATTTTATCTTTGTTTGCAGCAAGAAAAACTTCGGGAATTCTTGTCAATATCGGATTTCATCATACATCTATTGTACCAATTTTACATGGTAAGATAATGCACAAAGTGGGAGTGGAAGCTGTGGGAGTTGGAGCTTTGAAGCTTACTGGATACCTTAGGGAACAAATGCAGCAGAGAAATCTACATTTTTCTTCGTTATACACAGTGCGCACACTGAAAGAGAACCTTTGTTATGTTGCTATTGACTACGCCGCTGAACTGCGGAAGGATACAGAAGCATCATATGAAGTTCCTGTTGAGGGCTGGTTTACTCTTACACAAGAACGTTATCGAACAGGAGAGATTTTATTCCAGCCACGCATTGCAGGATTGAGTGCAATTGGTTTACATCAAGCTGTGGCACTCTGTATTGAACAATGCCATGCTGCAGGATTGACTCCTGATGATTCTTGGTTCAAGACCATTGTCTTGGCTGGGGGTACTGCGTGTTTACCTGGACTAGTAGAAAGATTAGATAAGGAACTGCGTGTTCTTCTTTCTCCATCCTTGTCCAATGGAATACGAGTTATGCCACCTCCATACGGCGCAGATTCAGCATGGTATGGGGCTAAGCTTCTTAGCAATTTGAGTACATTCCCGAATTCCTGGTGCATCAATAAAAAGGATTTCCGACCCAAATCAAGAAGAAACTTCCTATGGTGA	1443	42.13	MTSFILKILESAHRLNSTSSSSTSASSSNSSISSHVTESDQTVVCSSSTGEFDRVPLDVFMQILKLIGPKEAAKLTVICKSWKLIVSDNMLWISYLQNQTDPWDSMFFAETSLRSGYPLRTYPSQRQSFMHIYGQRARIPGAIIIDGGSGYCKFGWSKYDSPSGRAATFLEFGNIDSPMYSRLRHFFATIYSRMQVKSSSQPTVVSIPISQYGDTQDAKNARRQLKEAIYTSMFDMNVPSVCAISQAILSLFAARKTSGILVNIGFHHTSIVPILHGKIMHKVGVEAVGVGALKLTGYLREQMQQRNLHFSSLYTVRTLKENLCYVAIDYAAELRKDTEASYEVPVEGWFTLTQERYRTGEILFQPRIAGLSAIGLHQAVALCIEQCHAAGLTPDDSWFKTIVLAGGTACLPGLVERLDKELRVLLSPSLSNGIRVMPPPYGADSAWYGAKLLSNLSTFPNSWCINKKDFRPKSRRNFLW	480

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pslu1g06451	480	CDD	NBD-sugar-kinase-HSP70-actin	143	286	-	-
	Pslu1g06451	480	SUPERFAMILY	Actin-like ATPase domain	141	262	IPR043129	-
	Pslu1g06451	480	Gene3D	-	143	470	-	-
	Pslu1g06451	480	Gene3D	-	39	117	-	-
	Pslu1g06451	480	ProSiteProfiles	F-box domain profile.	49	95	IPR001810	GO:0005515(InterPro)
	Pslu1g06451	480	Pfam	F-box-like	53	94	IPR001810	GO:0005515(InterPro)
	Pslu1g06451	480	SMART	fbox-2	55	95	IPR001810	GO:0005515(InterPro)
	Pslu1g06451	480	SMART	actin-3	140	478	IPR004000	-
	Pslu1g06451	480	Pfam	Actin	313	469	IPR004000	-
	Pslu1g06451	480	Gene3D	-	247	445	-	-
	Pslu1g06451	480	PANTHER	ACTIN	150	470	IPR004000	-
	Pslu1g06451	480	SUPERFAMILY	F-box domain	49	136	IPR036047	GO:0005515(InterPro)
	Pslu1g06451	480	Gene3D	Actin; Chain A, domain 4	290	373	-	-
	Pslu1g06451	480	SUPERFAMILY	Actin-like ATPase domain	256	470	IPR043129	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pslu1g06451	K16616	actin-related protein 8, plant

Event-related genes

Select	Gene_1	Gene_2	Event_name
	134417	Pslu1g06451	Pslu2g00427

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Pslu	Pslu-Chr1:44294926	Pslu2g04672	Pslu-Chr2:31745552	dispersed
	Pslu	Pslu-Chr1:44294926	Pslu2g00427	Pslu-Chr2:2827300	wgd

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pslu1g01170	.	7	377	Cytoskeleton gene family	AT5G09810	36.649	4.17e-69	219.0
	Pslu1g06451	ACH	91	364	Cytoskeleton gene family	AT3G12110	29.897	1.39e-35	134.0
	Pslu2g00427	ACH	91	364	Cytoskeleton gene family	AT3G12110	32.082	3.07e-39	144.0
	Pslu2g04672	.	1	377	Cytoskeleton gene family	AT5G09810	98.939	0.0	775.0
	Pslu3g11245	ACH	1	377	Cytoskeleton gene family	AT3G12110	97.613	0.0	770.0
	Pslu3g11475	ACH	268	357	Cytoskeleton gene family	AT3G12110	90.0	2.56e-54	171.0
	Pslu3g18038	ACH	1	134	Cytoskeleton gene family	AT4G29340	76.119	6.62e-75	217.0
	Pslu3g18039	ACH	1	128	Cytoskeleton gene family	AT2G19760	78.125	9.57e-76	219.0
	Pslu4g03060	.	1	377	Cytoskeleton gene family	AT5G09810	98.939	0.0	775.0
	Pslu5g14749	.	107	377	Cytoskeleton gene family	AT5G09810	68.266	1.66e-130	373.0
	Pslu5g14750	.	1	82	Cytoskeleton gene family	AT3G12110	55.422	5.71e-28	101.0
	Pslu5g16606	ACH	1	131	Cytoskeleton gene family	AT4G29350	76.336	1.57e-76	221.0
	Pslu5g16608	ACH	1	134	Cytoskeleton gene family	AT4G29340	76.866	1.47e-76	221.0
	Pslu6g00526	.	233	375	Cytoskeleton gene family	AT5G09810	34.81	1.76e-18	80.5
	Pslu6g00766	ACH	1	377	Cytoskeleton gene family	AT5G09810	95.491	0.0	759.0