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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g06513 ATGTGGGACAAGACAAATAATAATGATAAAGTGCTTTCGGATGAAGTGGCTGCAAAATCATTAGAGTTGCAGCAACTGGAAGAGCAACACAGTTTGTTAAAATTGGCAGTGGAAATGGCTTGTGATGAACATAACCCTTTGGACTCGTACATTACTCAGCTCACTCAACAAATAGATGCAAAGAGGCATAATCTTGCTAATGATGAGTCAAAATGGGAAGCTGTCATAATGCCTTTAGAAGAGAAGAAAAGAAATCTTGAAGAAGCTCTGTGTGCAAAACAACCAGAGTCTCAAGAGAAACATCGAAAGTGGAAAAAACTTGAACATGACTTGGAGTCAGTAATGTCTGAAACAAAGCAGAGGGAGGAGGAAGTGTCCAATCTATCAACAGAAATTGAGAAACTGCCCAAATTGGCGACAAGAAGATCCTACATTGAGCGGGTAAAAGAGATCACTAAGAACAGCCGAAAACAAGACATTGACATAGAACGTATCTTAAAAGAGACCAGAGAGCTTCAACTGGAGAGTAATATGATTCAAGAACGCTTGCATCGAACTTATGCTGTGGTAGATGAAACACTCATGAGGGAGGCAAAGAAGGACCAAGTAGGTGAGCAATCTCACATTTTGCTGACAACCATCCATGAGAGTTTTGAAGAAATTTCAGAGAAGATCCTTGCAACTGACCGAGCTCGTAGAGAAATAATGGATCTTGAAACTAAGCTTACAAGTATTGCTGCCCGAAGTTTAAACATCGACAAACTACAAGCAGATCTTGATGCCATTAGAAAGGAAAACGAATACCTCCAATCCAGTTTGGGTAATCCATATACCCCTCATCCAAAAACTTGA 852 40.02 MWDKTNNNDKVLSDEVAAKSLELQQLEEQHSLLKLAVEMACDEHNPLDSYITQLTQQIDAKRHNLANDESKWEAVIMPLEEKKRNLEEALCAKQPESQEKHRKWKKLEHDLESVMSETKQREEEVSNLSTEIEKLPKLATRRSYIERVKEITKNSRKQDIDIERILKETRELQLESNMIQERLHRTYAVVDETLMREAKKDQVGEQSHILLTTIHESFEEISEKILATDRARREIMDLETKLTSIAARSLNIDKLQADLDAIRKENEYLQSSLGNPYTPHPKT 283
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g06513 283 Coils Coil 9 43 - -
Pslu1g06513 283 Coils Coil 51 71 - -
Pslu1g06513 283 Coils Coil 245 272 - -
Pslu1g06513 283 PANTHER JM1 PROTEIN 5 273 IPR008530 GO:0097602(PANTHER)|GO:2000060(PANTHER)
Pslu1g06513 283 Pfam CCDC22 protein coiled-coil region 7 246 IPR048348 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g06513 K23343 coiled-coil domain-containing protein 22
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:44698936 Pslu6g01492 Pslu-Chr6:9674896 dispersed