Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pslu1g06558	ATGAGCGTTGTACAGAAAGAGACCATTCAGGTGGTGGCACAAACCATCGGAGTTTCCAATTTATCGCCGGATGTTTTACCTTCTCTCACTGCAGATATCGAATATCGTATTCGCGAGATCATGCAGGAGGCTATAAAGTGTATGCATCATTCAAAGCGAACTGCAATGACTACAGATGATGTGGATACTGCACTTCAAATAAGAAAAATGGAGCCATTATACATTGGATCCGGGAATGCTTTGCGATTCAAAAGAGCTGCCAGGAGTAAGGATTTGTACTATGTTGAGAGCAAGGATGTGGAACTTAGGGAGGTAATTGAAGCCCCGCTTCAAAAAGCACCTCTAGATACTGCACTTGTCAATCACTGGCTTGCTATTGAAGGTGTACCACCTGCTATTCCTGAAAATGCTCCCCTTGAAGTACTTTTAGCCCCTATTGATACTAAGAAACCTGATAGCAAAGAAGATGGGGTTTCTGGTGACATTAAAACCCCTGTGAAGCATGTGCTCTCGATAGAGCTTCAGCTTTACTTTGAAAAGGTCACAGACCTCACTGTAAGTCGTTCAAACTCCATCATCTTTGACAAAGCATTGTTGAGCTTAGCCACTGATGCAGGGCTCCATCCATTGGTTCCTTATTTTATATATTTTGTTGCTGATGAGGTCACTCGTAATTTAAACAACTTCCAGCTTCTTTTTGCTTTAATGCGCCTTGTCCGTAGTCTTCTAATGAATCCTCACCTGCACATCGACCCATATCTGCACCAACTGATGCCGTCTGTAATGACCTGTCTCATTGCAAAAAGCTTGGGAAATAAGTTAACTGATAACCACTGGGAACTTAGGAACTTCACAGCTAACCTGGTGGGCTTAGTATGCGGAAGGTTTGGTTATGGGTATCATAATCTCCATTTACGTGTGAGTAGGACTCTTCTTCACGCTTTTATGGATCCAACAAAAGCATTTTCCCAGCATTATGGCGCTATAAAAGGGATTACCGCCCTTGGATCGAGCGTGGTTCGGTTGCTTATCCTACCAAATCTTGATTCATACCTACAATTTATAGAGCCAGAAATGCAGCTAGAGAAGCAAAAGAATGAGAGCAGGAGACAGGAGGCCTGGCGAGTACATGGTGCCTTAATGTGTGCAGCTGGACTTTGTATTTATAGTCAACTAAAGATGATTCCGAATTTCTTATATCCACCGACGCATAGCATCTGGAAGAGGAATGGGAAATTCGGGATAGCAAATCCAAACAAACGGAAAGCGGCAAGTATGAACAACATGATGGAGCAGCCACTTAAAAAAGTAGCGACAGGTGACAGTTCACATTTAGTAAAGGTGGAAATGCAAGGAGCTAGTAGTGGGTTTTCAATTACTCGTGGCGGCTCGGATGTTGGATTGCATGCACTACCAAGGTTTTTGCCTAATGACAACATGACAGGGGGCAGTGGCAGGAGGGATAAGTTTGGCCTTGCTCAATTGTCATCGGTGGCAGTATCCAGAGCATGGAAAAAGGAAATAAATGCAGGGCACTTGCTTCCTAAACTCTATGATATCTTTGGCCAAAGCATGTTTCCATTTGTACCTTCCCCTGAATTGTTTAATCTACACCTTTGA	1620	43.27	MSVVQKETIQVVAQTIGVSNLSPDVLPSLTADIEYRIREIMQEAIKCMHHSKRTAMTTDDVDTALQIRKMEPLYIGSGNALRFKRAARSKDLYYVESKDVELREVIEAPLQKAPLDTALVNHWLAIEGVPPAIPENAPLEVLLAPIDTKKPDSKEDGVSGDIKTPVKHVLSIELQLYFEKVTDLTVSRSNSIIFDKALLSLATDAGLHPLVPYFIYFVADEVTRNLNNFQLLFALMRLVRSLLMNPHLHIDPYLHQLMPSVMTCLIAKSLGNKLTDNHWELRNFTANLVGLVCGRFGYGYHNLHLRVSRTLLHAFMDPTKAFSQHYGAIKGITALGSSVVRLLILPNLDSYLQFIEPEMQLEKQKNESRRQEAWRVHGALMCAAGLCIYSQLKMIPNFLYPPTHSIWKRNGKFGIANPNKRKAASMNNMMEQPLKKVATGDSSHLVKVEMQGASSGFSITRGGSDVGLHALPRFLPNDNMTGGSGRRDKFGLAQLSSVAVSRAWKKEINAGHLLPKLYDIFGQSMFPFVPSPELFNLHL	539

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pslu1g06558	539	SMART	TAF-cls	2	68	IPR004823	-
	Pslu1g06558	539	Gene3D	-	166	370	IPR046344	GO:0006367(InterPro)
	Pslu1g06558	539	Pfam	TAF6 C-terminal HEAT repeat domain	166	348	IPR011442	GO:0006367(InterPro)
	Pslu1g06558	539	PANTHER	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6	3	530	IPR037796	GO:0000124(InterPro)\|GO:0003713(PANTHER)\|GO:0005669(InterPro)\|GO:0005669(PANTHER)\|GO:0006367(InterPro)\|GO:0016251(InterPro)\|GO:0016251(PANTHER)\|GO:0046695(InterPro)\|GO:0051123(PANTHER)
	Pslu1g06558	539	FunFam	Transcription initiation factor TFIID subunit 6	167	363	-	-
	Pslu1g06558	539	Pfam	TATA box binding protein associated factor (TAF)	1	65	IPR004823	-
	Pslu1g06558	539	Gene3D	Histone, subunit A	1	67	IPR009072	GO:0046982(InterPro)
	Pslu1g06558	539	SUPERFAMILY	ARM repeat	197	389	IPR016024	-
	Pslu1g06558	539	SUPERFAMILY	Histone-fold	2	66	IPR009072	GO:0046982(InterPro)
	Pslu1g06558	539	CDD	TAF6C	167	383	IPR011442	GO:0006367(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pslu1g06558	K03131	transcription initiation factor TFIID subunit 6

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Pslu	Pslu-Chr1:44963776	Pslu5g15278	Pslu-Chr5:111655456	wgd