Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pslu1g06593 | ATGGATGTAGTTGCAGGTGAAGCCTTTTTAGTTTGGAACAATTCTTCTCCATATTCTTCATCATTATATAAAACAAGAATCCCAAAACCATCTATTTTCAGATTATCAACAGCAACAAGAATAAGAAGGTGCAACCCTAAAATCTTACATTGTAGGAGTAATTGTACAACTTATGCTGCTGCTGTTACTAGATTCAGCAACCATAGGATAAGCATTCTTGATTCAAGAAATACTTTGAGGTCTGTTTTGGTTAAAAGTAGCAACCACCATTCAACAAATCCCAACCCAAATGTTGTGGATTTTGTTAAAAAAGGTTTGATTTTGGCTGCAGCATGTTGTGTCTTGGGATGCTGCAGAGCTGCTCATGGGGTTGAATATTCTGTGGGTTTAGAGCAGATTAAGTTGTCTGTTCATAATTCTTTACCCAAAGTTTTGATGGTGCTTAAAGTTTTGAAGGAACAAGGTTTAATCTTAGCTGCCCTTTTTGGTCTTTCTGCATTTTTCTCCATGGCTGAAACTTCAATTACCACTCTTTGGCCTTGGAAGGTTCGAGAATTGGCTGACAAAGAGTCTGAAAACGGTGTGTTCAAAATGCTTCGTAATGACGTTACTCGGTTCTTGACAACCATTCTTATTGGCACGACTGTTGTCAATATCGGAGCAACAGCACTGGTCACTGAAGCAGCAACTACAATCTTTGGCGAAGCAGGTGTCAGTGCAGCCACTGGAGTAATGACGGTTGCTGTTTTGCTACTCACGGAAATAACTCCAAAAAGTATAGCTGTTCACAATGCCACTGAGGTTGCAAGATTTGTGGTCAGGCCGATTGCATGGCTTTCTTTAGTTCTATATCCTGTTGGAAGAGTCGTAACATATCTCTCAATGGGAATGCTCAAGTTGCTTGGTCTGAAAGGAAGAAGTGAGCCATATGTGACTGAGGATGAGTTGAAGTTGATGTTGCGAGGGGCTGAACTAAGTGGGGCCATAGAAGAGGAAGAACAGGATATGATTGAAAATGTTTTGGAAATTAAAGACACATATGTTCGAGAGGTTATGACACCTTTGGTTGATGTTGTTGCTAGTGATTCTAGTGCAACACTTGTTGATTTCCACGCCTTGTGGGTGACTCATCAGTATTCAAGGGTACCGGTGTTTGAGCAACGTGTTGATAATATAGTCGGTATTGCATATGCAATGGATCTATTAGATTATGTTCAGAAGGGAGACCTATTAGAAACTACCACTGTGGGGGATATGGCTCATAAACCTGCTTATTTTGTGCCTGATTCAATGTCAGTGTGGAATCTTCTTAGAGAGTTTCGCATCAGGAAGGTACACATGGCAGTTGTCTTAAACGAATATGGTGGGACAGTTGGAATTGTAACACTGGAAGATGTTGTTGAAGAAATTGTTGGTGAAATTTTCGATGAAAATGATTCAAAAGAGGAAATAGAAAAAAAGACTGGATATATTGTAATGCGGGCTGAAGGAATCTATGATGTAGATGCAAATACATCCATTGACCAGCTTTCTGAAGATCTTAACATAAAGATGCCAGAGGGCCATCAATATGAAACGGTGTCAGGGTTTGTGTGTGAGGCATTTGGATACATTCCAAAGACAGGTGAAAGTATAAAAGTGGTACTTGAGAAGGAACAGGATCATGATGAGTATACAGAGGACGATGGCGATCGTCAAAATCAAAAAGAAAAAGAAAAGAACCAAATATTTCAAATAGAGATATTAGCAGGAAATGCAAGAAAGGTTGGTGCAGTTAGGTTTGAAAGTGTAACACATGAGGAGCTGGAGGAGGAGGAGGAGGAAACAACAAAAGATGTGAAGAAGCTGGTTCCAAAAATTATGAAAAGGAGATGGGGAGGTGATGATGATAATGAAACAAGTAGGAAGATTGAGTATGAGAAGAATGATGTAATCCCACAACTTGAAATCAAACAGGGAGAATAA | 1965 | 39.59 | MDVVAGEAFLVWNNSSPYSSSLYKTRIPKPSIFRLSTATRIRRCNPKILHCRSNCTTYAAAVTRFSNHRISILDSRNTLRSVLVKSSNHHSTNPNPNVVDFVKKGLILAAACCVLGCCRAAHGVEYSVGLEQIKLSVHNSLPKVLMVLKVLKEQGLILAALFGLSAFFSMAETSITTLWPWKVRELADKESENGVFKMLRNDVTRFLTTILIGTTVVNIGATALVTEAATTIFGEAGVSAATGVMTVAVLLLTEITPKSIAVHNATEVARFVVRPIAWLSLVLYPVGRVVTYLSMGMLKLLGLKGRSEPYVTEDELKLMLRGAELSGAIEEEEQDMIENVLEIKDTYVREVMTPLVDVVASDSSATLVDFHALWVTHQYSRVPVFEQRVDNIVGIAYAMDLLDYVQKGDLLETTTVGDMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGIVTLEDVVEEIVGEIFDENDSKEEIEKKTGYIVMRAEGIYDVDANTSIDQLSEDLNIKMPEGHQYETVSGFVCEAFGYIPKTGESIKVVLEKEQDHDEYTEDDGDRQNQKEKEKNQIFQIEILAGNARKVGAVRFESVTHEELEEEEEETTKDVKKLVPKIMKRRWGGDDDNETSRKIEYEKNDVIPQLEIKQGE | 654 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pslu1g06593 | 654 | Gene3D | - | 489 | 583 | IPR016169 | - | |
| Pslu1g06593 | 654 | PANTHER | HEMOLYSIN-RELATED | 131 | 611 | - | - | |
| Pslu1g06593 | 654 | MobiDBLite | consensus disorder prediction | 552 | 572 | - | - | |
| Pslu1g06593 | 654 | Pfam | CBS domain | 416 | 471 | IPR000644 | - | |
| Pslu1g06593 | 654 | Pfam | CBS domain | 348 | 406 | IPR000644 | - | |
| Pslu1g06593 | 654 | Pfam | Transporter associated domain | 494 | 595 | IPR005170 | - | |
| Pslu1g06593 | 654 | ProSiteProfiles | CBS domain profile. | 419 | 477 | IPR000644 | - | |
| Pslu1g06593 | 654 | ProSiteProfiles | CNNM transmembrane domain profile. | 147 | 333 | IPR002550 | - | |
| Pslu1g06593 | 654 | ProSiteProfiles | CBS domain profile. | 352 | 413 | IPR000644 | - | |
| Pslu1g06593 | 654 | SUPERFAMILY | CBS-domain pair | 335 | 474 | IPR046342 | - | |
| Pslu1g06593 | 654 | CDD | CBS-pair-CorC-HlyC-assoc | 348 | 468 | IPR044751 | - | |
| Pslu1g06593 | 654 | FunFam | Magnesium-cobalt efflux protein CorC | 329 | 479 | - | - | |
| Pslu1g06593 | 654 | SMART | CorC-HlyC-2 | 492 | 598 | IPR005170 | - | |
| Pslu1g06593 | 654 | SUPERFAMILY | FAD-binding-transporter-associated domain-like | 490 | 598 | IPR036318 | GO:0050660(InterPro) | |
| Pslu1g06593 | 654 | Gene3D | - | 327 | 482 | IPR046342 | - | |
| Pslu1g06593 | 654 | Pfam | Cyclin M transmembrane N-terminal domain | 156 | 333 | IPR002550 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pslu1g06593 | K03699 | magnesium and cobalt exporter, CNNM family |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pslu | Pslu-Chr1:45151388 | Pslu1g21522 | Pslu-Chr1:154519137 | dispersed |