Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pslu1g06603	ATGAGTAATAATAATATTGGCGATCTTCATAAGGTTTGGGAAATCAGAACCTTAAAGAAGAAAGTGGGTGCCGATGAAGCTCGTAAATTTCTTGAGAAGATCGCAAAACAAGTTCAACCGATCATGCGCAAACATAAATGGAGAGTCAAAGTTCTATCGGAAATGTGTCCAAAAAACCCTCGTCTTCTGGGTTTGAATGTTGGGCATGGTCTTCATGTAAAGCTAAGACTTCGAAGACCAAATACAGATTGGGATTTTTACCCTTTTCATGAAGTTCTTGATACAATGCTGCATGAACTTTGTCATAATGCCATCGGTCCGCATAATGTCAGCTTTTACAAACTCTGGGATGATCTCAGGAAGGAATGTGAGGAGCTGATGAGTAAAGGAATTTCTGGGTCTGGTGATGGGTTTGATCTTCCTGGTAGACGATTAGGGGGTTTCACTCGTCAACCACCACTTTCATCTCTACGCCAGACTGCACTTGTTGCAGCAGAAAATAGAGCTCGTCAAGGTGCTCTTTTACCAACAGGTCCTAATCGTCTTGGTGGTGATAAATCAATAATGTCTGCCCTAACTCCTGGACAAGCAGCTGCAATGGCTGCAGAAAGGAGATTACAAGATGATATATGGTGTGGTCTAGAGGAACTAGTTGAAGAACAAGAAAAAGAAAATGAACCTAGTGTCCCACAAGATCAAAGTGCTAAAACCTCGGTTTCTTCTAGTGGTCTACGTGCTAAAAGGAACCGCCAACCAATGAATGATCATTCAGAATCAAATTTTGTTGACTTGACTGATTTTCCCTCTGCGCTCAAGTCATCTGTTACAGACAACATAGTACCTAATAAGAAAAGCCGCCAAAAAGAATGCTGTATTGATTTAACAAGTGACGAACCCTCTACTAGTGGATCAGTGAGTACTCAAAAAACAGGATGTGACACCGAATCCCCTGGGTGGGAGTGCTTGACATGCACATTGTTGAATCCGCCTTTAGCTCCTATCTGTGAGCTATGTGGAACCCACAAACCAAAAGATGTTGAGGACAAGTACAAGACGTGGTCATGCAAATTTTGTACATTGGAAAATACTGTGAAGCTGGAAAAATGTGGAGCTTGTGGGCAGTGGAGATATTCTTATGGTGAACCCATAGCAACCCCTTCACCAAATGTGGGTACTTGA	1179	42.15	MSNNNIGDLHKVWEIRTLKKKVGADEARKFLEKIAKQVQPIMRKHKWRVKVLSEMCPKNPRLLGLNVGHGLHVKLRLRRPNTDWDFYPFHEVLDTMLHELCHNAIGPHNVSFYKLWDDLRKECEELMSKGISGSGDGFDLPGRRLGGFTRQPPLSSLRQTALVAAENRARQGALLPTGPNRLGGDKSIMSALTPGQAAAMAAERRLQDDIWCGLEELVEEQEKENEPSVPQDQSAKTSVSSSGLRAKRNRQPMNDHSESNFVDLTDFPSALKSSVTDNIVPNKKSRQKECCIDLTSDEPSTSGSVSTQKTGCDTESPGWECLTCTLLNPPLAPICELCGTHKPKDVEDKYKTWSCKFCTLENTVKLEKCGACGQWRYSYGEPIATPSPNVGT	392

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pslu1g06603	392	SUPERFAMILY	Ran binding protein zinc finger-like	315	342	IPR036443	-
	Pslu1g06603	392	ProSiteProfiles	Zinc finger RanBP2 type profile.	349	378	IPR001876	-
	Pslu1g06603	392	SMART	zf-4	317	341	IPR001876	-
	Pslu1g06603	392	SMART	zf-4	351	375	IPR001876	-
	Pslu1g06603	392	ProSiteProfiles	WLM domain profile.	3	207	IPR013536	-
	Pslu1g06603	392	Gene3D	-	311	351	-	-
	Pslu1g06603	392	ProSiteProfiles	Zinc finger RanBP2 type profile.	309	344	IPR001876	-
	Pslu1g06603	392	ProSitePatterns	Zinc finger RanBP2-type signature.	319	338	IPR001876	-
	Pslu1g06603	392	MobiDBLite	consensus disorder prediction	230	248	-	-
	Pslu1g06603	392	MobiDBLite	consensus disorder prediction	219	261	-	-
	Pslu1g06603	392	PANTHER	DNA-DEPENDENT METALLOPROTEASE WSS1	1	391	IPR053000	GO:0005634(PANTHER)\|GO:0006281(PANTHER)\|GO:0008237(PANTHER)
	Pslu1g06603	392	Pfam	WLM domain	11	206	IPR013536	-
	Pslu1g06603	392	ProSitePatterns	Zinc finger RanBP2-type signature.	353	372	IPR001876	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pslu1g06603	K22685	DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Pslu	Pslu-Chr1:45184492	Pslu6g16250	Pslu-Chr6:119359406	dispersed
	Pslu	Pslu-Chr1:45180378	Pslu1g06603	Pslu-Chr1:45184492	tandem