AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g20677 ATGTTTGGAGTCAAACAACCTTCAATTTTGAATTACATTGTACAACGATGGTGGTTGGCGTCGGTGGAGATGCGCGGGTTCGGTGGCGGCGGTGGAGATGCGCGGGTGGTGGCGGTGTTTGGCGTAGGTGGTGGTTTACGGAAAAAACAGTCAGTCAGATACAAATCAGAAAGTGTCTATCATTTATTTACCCAAGGTTCCTTCTTTGAAGCAAAAGATCGAACACCTGGAGTGCAAAGCAACAGGATGATTACGTCACAACAAAATACGGACATGAATACGGCAAAAGAGCAATTCTTGAAGGAATTTGGTGAATCTTATGGTTATCCGAACGCCCCTAACGACATTGATCATATCCGAGCTACTGAATTTAAAAGACTTGATGGAAATGTGTATTTGGATCATGCTGGTGCAACTTTATATTCTGAAAAACAGATGGAAGCGATATTTAAAGATCTTACTACCACTGTATATGGCAATCCACATAGTCAAAGCAGCTCTAGCTTGGCCACCACAGATGTTGTAGAAGATGCTCGTCATCAGGTTCTCAAACTCTGTAATGCGTCCCCCAAGGAATATAAATGTATATTTACATCCGGGGCAACAGCAGCTCTTAAACTTGTTGGTGAGGCGTTTCCTTGGAGCAGTGAGAGCACTTTCATGTATACAGTAGAGAATCACAACAGCGTGCTTGGAATAAGAGAATATGCTCTTGATAAAGGAGCTGCTGCAATAGCTGTAGACCTTGTGGAAGCCGTAGAATCGGATACATGTACAAGCGCTAGATCTTCCTTTAAGGTTTCACAGTGTCCTCTACAGAAGAGAAATGAAGCCAGGGTATGGGACGAAAAGCCTAACGGCCAAATATACAATTTATTTGCCTTGCCCTCAGAATGTAATTTCTCAGGAGTGAGGTTCAACCTTGATCTGATAGACATAATTAAGGAAGATTCAGAGAGAGTATTGGAAGGCTCTCAACATAGCAGGGGAAACTGGATGATTCTACTTGATGCTGCAAAAGGATGTTCCACGGACCCTCCAAATTTATCAGAGCATAAGGCGGACTTCGTTGCTATCTCATTTTACAAGCTTTTTGGCTATCCAACTGGACTTGGAGCATTAATAGTTCGAAATGAAGCTGCAAAGTTACTAAAGAAGACCTACTTTAGTGGAGGCACAGTAGCTGCATCAATAGCTGACATTGACTTTGTGAAAAGAAGAGAAGGTATTGAGGAATCATTTGAAGACGGAACACTATCGTTCTTGAACATAGGATCCATTCGCTATGGATTAGATATCCTCAACAGTTTGACCAAAGTTTCCATATCACGGCACACATCAGCACTTGCGAGATATACGCGAAAGAGGCTTTTGGCTTTAAGGCATGCAGATGGGGAGGAGGTTTGCAAAATATACGGCCTGGATTATTTAAAGGCATCTTATAGTGGACTTGGTCCTGTAGTTTCTTTCAACTTGAAAAGGCCTGATGGCTCTTGGGTTGGTCATCGTGAAGTGGAAAAATTGGCTTCTTTGTCTGGAATTCAGCTGCGGACAGGATGCTTTTGCAATCCTGGAGCATGTTCTAAGTATCTTGGCTTATCTCATTCGGATCTTCTATCCAACATTGAGGCTGGGCATGTTTGCTGGGATGACTATGATATATTACATGGAAAACCAACTGGAGCTGTTAGAGTATCTTTTGGTTATATGTCAACATTTGAAGATGCCTGGAAATTCATGAACTTCATCGTAAGTTCCTTTGTAGTGTTACCTACCAATACTAGACATCCACATTCGTTTATACCCAGCGCTATCCAGCCTGCCACAGAAGGTCAAGAAAAGATAAGAAAACATTGTCTTACGTCAATTGTTGTGTACCCGATTAAGTCATGTGCAGGATTCAGAGTGGACAGTTGGCCTCTAAGCAGTACTGGATTGTTATATGATCGAGAATGGCTTCTTAAAAGCATGAACAGTGAAATACTTACACAGAAGAAGGTACCTGAAATGTACTTCATTGGCACAAAGATTGACCTCAAAACAGGAATGCTTCATGTGGAATCTCCTCGGTGCAAAGAGAAGCTGCTTATCGAACTTAAATCGAATCATTATGCTGCGGTAGAAGAAATAAATGTACATGCCCAAAGATATGAAGTTCTGGGCTATGATAATGAGATTGACACTTGGTTCAGCAATGCAATTGGCCGACCTTGTTATTTATTAAGATCTAGTTCCAGAGGTTGTAGTCGCTTGAACGGGAGCAAAAGCATGGGCATATGCCGAGACGTAAATACCAGATTAAACTTTGTTAATGAAGCTCAGCTTTTATTGATATCCGAAGAAAGCGTATCCAACCTCAACCATCGATTAAAGTCAAGTAAAGAGGAAGGATCCGTTGGATCACCTATGGAAGTGGACTCAATGAGATTCCGGCCCAATCTTGTTATATCTGGTGGTGATCCATATGTTGAAGACAGCTGGAGTGGTCTTAAGATTGGAAACAATCACTTCATGTCATTGGGAGGTTGCAATCGTTGCCGTATGATAAATTTGAATTATCAAGCTGGCGAGTTGCAGAAATCAAATGAGCCTCTAGCTACTTTAGCTGCATACAGAAGAGACAAGGGGAAAATTCTCTTTGGAATTCTACTGAGGTATGAGCGTGACAACGAAACCGCGGAAGAAATATCTCCATGGATACAAGTGGGCCAGGAAGTATACCCTGAAGTAGAATGA 2736 41.96 MFGVKQPSILNYIVQRWWLASVEMRGFGGGGGDARVVAVFGVGGGLRKKQSVRYKSESVYHLFTQGSFFEAKDRTPGVQSNRMITSQQNTDMNTAKEQFLKEFGESYGYPNAPNDIDHIRATEFKRLDGNVYLDHAGATLYSEKQMEAIFKDLTTTVYGNPHSQSSSSLATTDVVEDARHQVLKLCNASPKEYKCIFTSGATAALKLVGEAFPWSSESTFMYTVENHNSVLGIREYALDKGAAAIAVDLVEAVESDTCTSARSSFKVSQCPLQKRNEARVWDEKPNGQIYNLFALPSECNFSGVRFNLDLIDIIKEDSERVLEGSQHSRGNWMILLDAAKGCSTDPPNLSEHKADFVAISFYKLFGYPTGLGALIVRNEAAKLLKKTYFSGGTVAASIADIDFVKRREGIEESFEDGTLSFLNIGSIRYGLDILNSLTKVSISRHTSALARYTRKRLLALRHADGEEVCKIYGLDYLKASYSGLGPVVSFNLKRPDGSWVGHREVEKLASLSGIQLRTGCFCNPGACSKYLGLSHSDLLSNIEAGHVCWDDYDILHGKPTGAVRVSFGYMSTFEDAWKFMNFIVSSFVVLPTNTRHPHSFIPSAIQPATEGQEKIRKHCLTSIVVYPIKSCAGFRVDSWPLSSTGLLYDREWLLKSMNSEILTQKKVPEMYFIGTKIDLKTGMLHVESPRCKEKLLIELKSNHYAAVEEINVHAQRYEVLGYDNEIDTWFSNAIGRPCYLLRSSSRGCSRLNGSKSMGICRDVNTRLNFVNEAQLLLISEESVSNLNHRLKSSKEEGSVGSPMEVDSMRFRPNLVISGGDPYVEDSWSGLKIGNNHFMSLGGCNRCRMINLNYQAGELQKSNEPLATLAAYRRDKGKILFGILLRYERDNETAEEISPWIQVGQEVYPEVE 911
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g20677 911 SUPERFAMILY PLP-dependent transferases 115 584 IPR015424 -
Pslu1g20677 911 Gene3D Aspartate Aminotransferase, domain 1 432 589 IPR015422 -
Pslu1g20677 911 ProSiteProfiles MOSC domain profile. 743 909 IPR005302 GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro)
Pslu1g20677 911 Gene3D - 146 431 IPR015421 -
Pslu1g20677 911 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 94 588 - -
Pslu1g20677 911 Hamap Molybdenum cofactor sulfurase [MOCOS]. 106 908 IPR028886 GO:0006777(InterPro)|GO:0008265(InterPro)
Pslu1g20677 911 Pfam MOSC domain 765 907 IPR005302 GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro)
Pslu1g20677 911 Pfam Aminotransferase class-V 131 243 IPR000192 -
Pslu1g20677 911 Pfam Aminotransferase class-V 330 576 IPR000192 -
Pslu1g20677 911 SUPERFAMILY MOSC N-terminal domain-like 620 749 - -
Pslu1g20677 911 Pfam MOSC N-terminal beta barrel domain 620 737 IPR005303 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g20677 K15631 molybdenum cofactor sulfurtransferase [EC:2.8.1.9]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:149205619 Pslu4g01165 Pslu-Chr4:7563467 dispersed
Pslu Pslu-Chr4:43815610 Pslu1g20677 Pslu-Chr1:149205619 transposed
Pslu Pslu-Chr5:991883 Pslu1g20677 Pslu-Chr1:149205619 transposed
Pslu Pslu-Chr5:81053345 Pslu1g20677 Pslu-Chr1:149205619 transposed
Pslu Pslu-Chr7:78363020 Pslu1g20677 Pslu-Chr1:149205619 transposed
Pslu Pslu-Chr1:446648 Pslu1g20677 Pslu-Chr1:149205619 wgd