Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pslu1g20677 | ATGTTTGGAGTCAAACAACCTTCAATTTTGAATTACATTGTACAACGATGGTGGTTGGCGTCGGTGGAGATGCGCGGGTTCGGTGGCGGCGGTGGAGATGCGCGGGTGGTGGCGGTGTTTGGCGTAGGTGGTGGTTTACGGAAAAAACAGTCAGTCAGATACAAATCAGAAAGTGTCTATCATTTATTTACCCAAGGTTCCTTCTTTGAAGCAAAAGATCGAACACCTGGAGTGCAAAGCAACAGGATGATTACGTCACAACAAAATACGGACATGAATACGGCAAAAGAGCAATTCTTGAAGGAATTTGGTGAATCTTATGGTTATCCGAACGCCCCTAACGACATTGATCATATCCGAGCTACTGAATTTAAAAGACTTGATGGAAATGTGTATTTGGATCATGCTGGTGCAACTTTATATTCTGAAAAACAGATGGAAGCGATATTTAAAGATCTTACTACCACTGTATATGGCAATCCACATAGTCAAAGCAGCTCTAGCTTGGCCACCACAGATGTTGTAGAAGATGCTCGTCATCAGGTTCTCAAACTCTGTAATGCGTCCCCCAAGGAATATAAATGTATATTTACATCCGGGGCAACAGCAGCTCTTAAACTTGTTGGTGAGGCGTTTCCTTGGAGCAGTGAGAGCACTTTCATGTATACAGTAGAGAATCACAACAGCGTGCTTGGAATAAGAGAATATGCTCTTGATAAAGGAGCTGCTGCAATAGCTGTAGACCTTGTGGAAGCCGTAGAATCGGATACATGTACAAGCGCTAGATCTTCCTTTAAGGTTTCACAGTGTCCTCTACAGAAGAGAAATGAAGCCAGGGTATGGGACGAAAAGCCTAACGGCCAAATATACAATTTATTTGCCTTGCCCTCAGAATGTAATTTCTCAGGAGTGAGGTTCAACCTTGATCTGATAGACATAATTAAGGAAGATTCAGAGAGAGTATTGGAAGGCTCTCAACATAGCAGGGGAAACTGGATGATTCTACTTGATGCTGCAAAAGGATGTTCCACGGACCCTCCAAATTTATCAGAGCATAAGGCGGACTTCGTTGCTATCTCATTTTACAAGCTTTTTGGCTATCCAACTGGACTTGGAGCATTAATAGTTCGAAATGAAGCTGCAAAGTTACTAAAGAAGACCTACTTTAGTGGAGGCACAGTAGCTGCATCAATAGCTGACATTGACTTTGTGAAAAGAAGAGAAGGTATTGAGGAATCATTTGAAGACGGAACACTATCGTTCTTGAACATAGGATCCATTCGCTATGGATTAGATATCCTCAACAGTTTGACCAAAGTTTCCATATCACGGCACACATCAGCACTTGCGAGATATACGCGAAAGAGGCTTTTGGCTTTAAGGCATGCAGATGGGGAGGAGGTTTGCAAAATATACGGCCTGGATTATTTAAAGGCATCTTATAGTGGACTTGGTCCTGTAGTTTCTTTCAACTTGAAAAGGCCTGATGGCTCTTGGGTTGGTCATCGTGAAGTGGAAAAATTGGCTTCTTTGTCTGGAATTCAGCTGCGGACAGGATGCTTTTGCAATCCTGGAGCATGTTCTAAGTATCTTGGCTTATCTCATTCGGATCTTCTATCCAACATTGAGGCTGGGCATGTTTGCTGGGATGACTATGATATATTACATGGAAAACCAACTGGAGCTGTTAGAGTATCTTTTGGTTATATGTCAACATTTGAAGATGCCTGGAAATTCATGAACTTCATCGTAAGTTCCTTTGTAGTGTTACCTACCAATACTAGACATCCACATTCGTTTATACCCAGCGCTATCCAGCCTGCCACAGAAGGTCAAGAAAAGATAAGAAAACATTGTCTTACGTCAATTGTTGTGTACCCGATTAAGTCATGTGCAGGATTCAGAGTGGACAGTTGGCCTCTAAGCAGTACTGGATTGTTATATGATCGAGAATGGCTTCTTAAAAGCATGAACAGTGAAATACTTACACAGAAGAAGGTACCTGAAATGTACTTCATTGGCACAAAGATTGACCTCAAAACAGGAATGCTTCATGTGGAATCTCCTCGGTGCAAAGAGAAGCTGCTTATCGAACTTAAATCGAATCATTATGCTGCGGTAGAAGAAATAAATGTACATGCCCAAAGATATGAAGTTCTGGGCTATGATAATGAGATTGACACTTGGTTCAGCAATGCAATTGGCCGACCTTGTTATTTATTAAGATCTAGTTCCAGAGGTTGTAGTCGCTTGAACGGGAGCAAAAGCATGGGCATATGCCGAGACGTAAATACCAGATTAAACTTTGTTAATGAAGCTCAGCTTTTATTGATATCCGAAGAAAGCGTATCCAACCTCAACCATCGATTAAAGTCAAGTAAAGAGGAAGGATCCGTTGGATCACCTATGGAAGTGGACTCAATGAGATTCCGGCCCAATCTTGTTATATCTGGTGGTGATCCATATGTTGAAGACAGCTGGAGTGGTCTTAAGATTGGAAACAATCACTTCATGTCATTGGGAGGTTGCAATCGTTGCCGTATGATAAATTTGAATTATCAAGCTGGCGAGTTGCAGAAATCAAATGAGCCTCTAGCTACTTTAGCTGCATACAGAAGAGACAAGGGGAAAATTCTCTTTGGAATTCTACTGAGGTATGAGCGTGACAACGAAACCGCGGAAGAAATATCTCCATGGATACAAGTGGGCCAGGAAGTATACCCTGAAGTAGAATGA | 2736 | 41.96 | MFGVKQPSILNYIVQRWWLASVEMRGFGGGGGDARVVAVFGVGGGLRKKQSVRYKSESVYHLFTQGSFFEAKDRTPGVQSNRMITSQQNTDMNTAKEQFLKEFGESYGYPNAPNDIDHIRATEFKRLDGNVYLDHAGATLYSEKQMEAIFKDLTTTVYGNPHSQSSSSLATTDVVEDARHQVLKLCNASPKEYKCIFTSGATAALKLVGEAFPWSSESTFMYTVENHNSVLGIREYALDKGAAAIAVDLVEAVESDTCTSARSSFKVSQCPLQKRNEARVWDEKPNGQIYNLFALPSECNFSGVRFNLDLIDIIKEDSERVLEGSQHSRGNWMILLDAAKGCSTDPPNLSEHKADFVAISFYKLFGYPTGLGALIVRNEAAKLLKKTYFSGGTVAASIADIDFVKRREGIEESFEDGTLSFLNIGSIRYGLDILNSLTKVSISRHTSALARYTRKRLLALRHADGEEVCKIYGLDYLKASYSGLGPVVSFNLKRPDGSWVGHREVEKLASLSGIQLRTGCFCNPGACSKYLGLSHSDLLSNIEAGHVCWDDYDILHGKPTGAVRVSFGYMSTFEDAWKFMNFIVSSFVVLPTNTRHPHSFIPSAIQPATEGQEKIRKHCLTSIVVYPIKSCAGFRVDSWPLSSTGLLYDREWLLKSMNSEILTQKKVPEMYFIGTKIDLKTGMLHVESPRCKEKLLIELKSNHYAAVEEINVHAQRYEVLGYDNEIDTWFSNAIGRPCYLLRSSSRGCSRLNGSKSMGICRDVNTRLNFVNEAQLLLISEESVSNLNHRLKSSKEEGSVGSPMEVDSMRFRPNLVISGGDPYVEDSWSGLKIGNNHFMSLGGCNRCRMINLNYQAGELQKSNEPLATLAAYRRDKGKILFGILLRYERDNETAEEISPWIQVGQEVYPEVE | 911 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pslu1g20677 | 911 | SUPERFAMILY | PLP-dependent transferases | 115 | 584 | IPR015424 | - | |
| Pslu1g20677 | 911 | Gene3D | Aspartate Aminotransferase, domain 1 | 432 | 589 | IPR015422 | - | |
| Pslu1g20677 | 911 | ProSiteProfiles | MOSC domain profile. | 743 | 909 | IPR005302 | GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro) | |
| Pslu1g20677 | 911 | Gene3D | - | 146 | 431 | IPR015421 | - | |
| Pslu1g20677 | 911 | PANTHER | MOLYBDOPTERIN COFACTOR SULFURASE MOSC | 94 | 588 | - | - | |
| Pslu1g20677 | 911 | Hamap | Molybdenum cofactor sulfurase [MOCOS]. | 106 | 908 | IPR028886 | GO:0006777(InterPro)|GO:0008265(InterPro) | |
| Pslu1g20677 | 911 | Pfam | MOSC domain | 765 | 907 | IPR005302 | GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro) | |
| Pslu1g20677 | 911 | Pfam | Aminotransferase class-V | 131 | 243 | IPR000192 | - | |
| Pslu1g20677 | 911 | Pfam | Aminotransferase class-V | 330 | 576 | IPR000192 | - | |
| Pslu1g20677 | 911 | SUPERFAMILY | MOSC N-terminal domain-like | 620 | 749 | - | - | |
| Pslu1g20677 | 911 | Pfam | MOSC N-terminal beta barrel domain | 620 | 737 | IPR005303 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pslu1g20677 | K15631 | molybdenum cofactor sulfurtransferase [EC:2.8.1.9] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pslu | Pslu-Chr1:149205619 | Pslu4g01165 | Pslu-Chr4:7563467 | dispersed | |
| Pslu | Pslu-Chr4:43815610 | Pslu1g20677 | Pslu-Chr1:149205619 | transposed | |
| Pslu | Pslu-Chr5:991883 | Pslu1g20677 | Pslu-Chr1:149205619 | transposed | |
| Pslu | Pslu-Chr5:81053345 | Pslu1g20677 | Pslu-Chr1:149205619 | transposed | |
| Pslu | Pslu-Chr7:78363020 | Pslu1g20677 | Pslu-Chr1:149205619 | transposed | |
| Pslu | Pslu-Chr1:446648 | Pslu1g20677 | Pslu-Chr1:149205619 | wgd |