Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pslu1g20744 | ATGAATAGTAATCCAGCAACGCCGATGAACGCAAACGCGCCGTCGTCTAGCTCCGGTGGCGCCGGATCACCTGATGTATCTACTCCAAGAAGAAATTCAAAACGACCTAAGTATTCTAGGTTTACACAACAGGAACTGCCAGCGTGCAAGCCAATTCTTACTCCAAAATGGGTTATTTCAGCGTTCATGCTTGTGACCATTGTCTTCATCCCAATAGGACTTGCTTCACTCTTTGCGTCTCGTGATGTAGTTGAAATCATTGACCGGTATGATAATGCCTGCATAGAAGGCTCAAAAAGTCAAAAGGTCGAATTCATACAATCCAATAGAAATAAAACCTGCGTGAGAAGCTTGACAGTCAGAAAGCGTATGAAGCAGCCTATCTATGTTTATTATCAGCTAGACAATTTTTATCAGAATCACCGCAGGTATGTCAAGAGCCGAAGTGATACGCAATTGAGGAATCGTGGTGATGAGAATGACACAAGTACCTGTAAGCCAGAGCATGATGCAAATGGAATGCCGATAGTGCCTTGTGGTCTTGTAGCCTGGAGTTTGTTCAATGACACATATAGCTTCTCCACCAGTAACAACCGCCCATTGAATGTAAACAAGAGGCATATTTCATGGAAGAGTGACCGAGAAGACAAGTTTGGCAGTGATGTCTTTCCAAAAAATTTCCAAAATGGAAGTCTTATTGGCGGTGGACGTCTCAATGAGTCTAAACCACTGAGTGAGCAGGAAGACCTTATTGTGTGGATGCGAACTGCAGCTCTGCCAACTTTTAGGAAGTTGTATGGGAAGATAGAGGTGGATATCGAGGCAGGCGAGACAATAAATGTGGTATTGGAGAACAACTACAACACTTACAGTTTCAGTGGCAAGAAGAAACTTGTGCTCTCAACCACCAGCTGGCTTGGTGGAAAAAATAATTTTATCGGCATTGCATATCTTGCTGTTGGTGGATTGTGCTTCTTACTAGCTACAACTTTTACTCTCATATATCTCATTAAGCCAAGGCATCTTGGAGATCCTACTTATTTGTCATGGAACAGAAACCCTGGTGGTCACTGA | 1074 | 43.11 | MNSNPATPMNANAPSSSSGGAGSPDVSTPRRNSKRPKYSRFTQQELPACKPILTPKWVISAFMLVTIVFIPIGLASLFASRDVVEIIDRYDNACIEGSKSQKVEFIQSNRNKTCVRSLTVRKRMKQPIYVYYQLDNFYQNHRRYVKSRSDTQLRNRGDENDTSTCKPEHDANGMPIVPCGLVAWSLFNDTYSFSTSNNRPLNVNKRHISWKSDREDKFGSDVFPKNFQNGSLIGGGRLNESKPLSEQEDLIVWMRTAALPTFRKLYGKIEVDIEAGETINVVLENNYNTYSFSGKKKLVLSTTSWLGGKNNFIGIAYLAVGGLCFLLATTFTLIYLIKPRHLGDPTYLSWNRNPGGH | 357 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pslu1g20744 | 357 | MobiDBLite | consensus disorder prediction | 148 | 169 | - | - | |
| Pslu1g20744 | 357 | Pfam | LEM3 (ligand-effect modulator 3) family - CDC50 family | 77 | 340 | IPR005045 | GO:0016020(InterPro) | |
| Pslu1g20744 | 357 | PANTHER | CELL CYCLE CONTROL PROTEIN 50 | 29 | 349 | IPR005045 | GO:0005783(PANTHER)|GO:0005794(PANTHER)|GO:0005886(PANTHER)|GO:0016020(InterPro) | |
| Pslu1g20744 | 357 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Pslu1g20744 | 357 | PIRSF | Lem3-Cdc50 | 7 | 353 | IPR005045 | GO:0016020(InterPro) | |
| Pslu1g20744 | 357 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - | |
| Pslu1g20744 | 357 | MobiDBLite | consensus disorder prediction | 148 | 166 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pslu1g20744 | K26935 | cell cycle control protein 50 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 134840 | Pslu1g20744 | Pslu3g15885 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pslu | Pslu-Chr2:25020668 | Pslu1g20744 | Pslu-Chr1:149612868 | transposed | |
| Pslu | Pslu-Chr2:123163015 | Pslu1g20744 | Pslu-Chr1:149612868 | transposed | |
| Pslu | Pslu-Chr5:100238533 | Pslu1g20744 | Pslu-Chr1:149612868 | transposed | |
| Pslu | Pslu-Chr7:49306297 | Pslu1g20744 | Pslu-Chr1:149612868 | transposed | |
| Pslu | Pslu-Chr1:149612868 | Pslu3g15885 | Pslu-Chr3:114321728 | wgd |