AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g20825 ATGGGTTACAGCAAACATGGTGGGAAAAAGGAAGAAGAAGAAGAAAGAAGAACACAATCATCAATTGTTAATGATGCGTTGCTTCTAACGACCATGTGTCTCATTGGTTTATCGGTTGATGTTCATATCAAGGATGGTTCTGTTTATTCTGGAATCTTCCACACTGCCTGTGTTGATGACCGCTATGCTATTGTGTTGAAGCGAGCAAGGTTGGTCAAGAAAGGAAGTTGTAATTCAAATGTGGCCAATGATGATGTGATAGATACACTTATAATCCAATCAAGGGATCTTGTTCAAGTGGTTGCTAAGAGAGTATTGCTTCCATCAGACGGTTCTGCTGGACATGGAACTGGGGAGGAGACAGGGGCTGTTGCATGCACCTTTCCTTCTAATGGAACTCCATTGGCAGACTCAAATAAAACAACTAGCAAGTCTAGTGTTAGTCAGCCACATACTAATTCAAGATGCTCCTCTGGAACTGAGAATGGGTTTGCTAATGGATCAAGACCCGAGGTTGCTAATGGATCTAGACCAGAAGTCAATAGAAATGCAGATGCTCATGAAGTTCAAGCAAAAACGTTTAAAGTCAATGGACCTTCTTCTACCGTCTCTTCAGAACCATTTGTCAGTTCATCATCAACTCCAAGTGAAACCGTCACGTCCAAAATTTCAAACAGTAATCGAATCGCTAAGGAGTTTAAACTTAACCCTGGAGCAAAAATCTTTTCCCCATCGTTTCCCAATAAGAGATCACCGACCCCTCCAGCAATGTCGACGGGTGCAAATGTTGCTTACATTCCCGAAAGTTATCAATCCGTCCCAGTTAACACTCCGCAACCGGAAATTGAGATAAGCCCGTATGCTCCTCGTCCTTTGCCTGTTAAGTTTGTTCAACATGGAGGCAATGATGTACAACATCCTCCGCCTATTGTTGGATATATGACAAATAGGAGTCAACCAGTTAGATACGTTGGGCAGTATCATCCAGTTCAAACAGCGCCTACCTATGTCCAGCCAAGCCCTCAGAATGTAATGGTTGGAAGATTAGGACCGGTTGTCTATGTTCATCCAGTTTCTCAAGACTTGATCCCGAGCACAACCGGCTTCCCTCAAATGTCTACATGTTCTATCTTAACTCCCCACCAAGTCCACGTCCCCAAACACCAAGGTAATGTAGCAGGTCAAGCAGTGCAGCTATGTGCAACTCCTCCGTTTATAGCTGCTGGTGGTGGTCAGGCACCGTTTGTTTTGCCAAGTCACATTCCCATTTCACAACCACCTTACCCTGTGATCCGCCCGATCCCAGTTCCTGGTCCAAACGGTTTCTTAGTATCAAAGTTTTCTTAG 1347 44.17 MGYSKHGGKKEEEEERRTQSSIVNDALLLTTMCLIGLSVDVHIKDGSVYSGIFHTACVDDRYAIVLKRARLVKKGSCNSNVANDDVIDTLIIQSRDLVQVVAKRVLLPSDGSAGHGTGEETGAVACTFPSNGTPLADSNKTTSKSSVSQPHTNSRCSSGTENGFANGSRPEVANGSRPEVNRNADAHEVQAKTFKVNGPSSTVSSEPFVSSSSTPSETVTSKISNSNRIAKEFKLNPGAKIFSPSFPNKRSPTPPAMSTGANVAYIPESYQSVPVNTPQPEIEISPYAPRPLPVKFVQHGGNDVQHPPPIVGYMTNRSQPVRYVGQYHPVQTAPTYVQPSPQNVMVGRLGPVVYVHPVSQDLIPSTTGFPQMSTCSILTPHQVHVPKHQGNVAGQAVQLCATPPFIAAGGGQAPFVLPSHIPISQPPYPVIRPIPVPGPNGFLVSKFS 448
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g20825 448 MobiDBLite consensus disorder prediction 134 169 - -
Pslu1g20825 448 Pfam Ataxin 2 SM domain 24 103 IPR025852 -
Pslu1g20825 448 PANTHER ATAXIN 2-RELATED 138 411 IPR045117 GO:0003723(InterPro)|GO:0003729(PANTHER)|GO:0010494(PANTHER)|GO:0034063(PANTHER)
Pslu1g20825 448 MobiDBLite consensus disorder prediction 197 222 - -
Pslu1g20825 448 MobiDBLite consensus disorder prediction 134 179 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g20825 - -