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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g20848 ATGGTTCAAACACTAGAAGCCATCAAGGGTGGTGGTGGATCCATCAAAGTTGGAACCACCGGCACCATCAACGCCTTAATGTCAAGGGAACTACAGTCAGTTAAAGTTGCATCTCCGAGAGCAGTCCCATTCATAATGAAATCTCCAAAACGAGCCATGGAACCTAAAGATGCTACCACAGGTACAAATTCTAAAGCAGGAGTACAAGCGGATGAAGCAAGCACTAGTTGCAGTGACAATGGTAGCAAATTGACTGAAAAACACACTGGTGTTTCTCAGAAAACGAAGCACCATCATGCTAGAAAAGATAGCAGAAATCCTTTTCTACGTTCTGATAGTACATCTGTTGATGGAAATGGAACTCCTAGTAGTAGGAAGAACGACAAGAAGAGGTCTTGTATCGTTGAAATAGTCGACATAAAATGTGGAGTTCCTACAAATCCAATAACAAATAGGTTGAAGAAACTCACTTTCTTGAAGCTTTCTGAAGCCAATGGCATAAAGTAA 507 41.22 MVQTLEAIKGGGGSIKVGTTGTINALMSRELQSVKVASPRAVPFIMKSPKRAMEPKDATTGTNSKAGVQADEASTSCSDNGSKLTEKHTGVSQKTKHHHARKDSRNPFLRSDSTSVDGNGTPSSRKNDKKRSCIVEIVDIKCGVPTNPITNRLKKLTFLKLSEANGIK 168
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g20848 168 MobiDBLite consensus disorder prediction 46 129 - -
Pslu1g20848 168 MobiDBLite consensus disorder prediction 57 88 - -
Pslu1g20848 168 PANTHER BNAA10G09140D PROTEIN 1 164 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g20848 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
4374056 Pslu Pslu1g20848 Pslu-Chr1:150201397 Pslu2g00611 Pslu-Chr2:3930902
4436894 Pslu Pslu5g15330 Pslu-Chr5:111984214 Pslu1g20848 Pslu-Chr1:150201397