AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g20849 ATGACCGGCCACCACTTTACTACTACCGCCACAGGAAAATCAACAATCCTGCTCCTTCCATCACATTCACCCCCTAGCATCAGGAAAGTGACAACGAATATCAGGTTCAAATGTTCTATTGAGTTACCAATATCAACCAAGGATGCAGCTAAACATGTTGTATCAGGTATTGCTGCTTCATTGGTACTTTTGTCCTCAACAAATCAGGTTTTGGCGACAGAACTATCACATAATAGTTTATGCCAGATTGCAAGTACCACTAGCAATATCCCAGCTCTTCCTCTTGATGAGGGTTCGAATCTGATGATGATGAAAGGGATGACAGCAAGAAACTTTGATCCCGTAAGATACTCCGGAAGATGGTTTGAAGTTGCTTCACTTAAGCGTGGATTTGCTGGTCAAGGTCAAGAAGATTGCCACTGCACCCAGGGAGTGTATACAATTGATATGGCAACACCAGCGATCCAAGTAGACACTTTCTGTGTTCACGGTGGGCCTAATGGGTATATCACTGGTATACGAGGTAGAGTTCAGTGTCTTTCAGAGGAAGATACGGGGAATACCGAAACGGATTTAGAAAGACTGGAGATGATTAAAGAAAAGTGTTACCTCCGGTTTCCCACATTGCCTTTCATACCGAAAGAACCTTATGATGTGATTGATACCGATTATGACAATTTCGCCCTTGTTTCTGGAGCAAAAGACAAGAGCTTTATTCAGATATACTCGAGGACACCAAATCCAGGGCCAGAGTTCATAGAAAAGTACAAGCTTGTGTTAGCTGATTTTGGCTATGATCCAAGCAAAATCAAGGACACTCCACAAGACTGTGAGGTGTCAGATAGCCGATTAGCTGCAATGATGTCAATGAATGGAATGCAACAAGCATTAACAAATCAGTTTCCTGATCTTGAACTCAATTCTGCTGTTAAGTTTGATCCCTTCACAAGTGTATTTGACACCTTGAAGAAACTTGTGCAGCTATATTTCAAGTAG 996 42.07 MTGHHFTTTATGKSTILLLPSHSPPSIRKVTTNIRFKCSIELPISTKDAAKHVVSGIAASLVLLSSTNQVLATELSHNSLCQIASTTSNIPALPLDEGSNLMMMKGMTARNFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQGVYTIDMATPAIQVDTFCVHGGPNGYITGIRGRVQCLSEEDTGNTETDLERLEMIKEKCYLRFPTLPFIPKEPYDVIDTDYDNFALVSGAKDKSFIQIYSRTPNPGPEFIEKYKLVLADFGYDPSKIKDTPQDCEVSDSRLAAMMSMNGMQQALTNQFPDLELNSAVKFDPFTSVFDTLKKLVQLYFK 331
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g20849 331 ProSitePatterns Lipocalin signature. 111 124 IPR022272 -
Pslu1g20849 331 Gene3D - 106 287 IPR012674 -
Pslu1g20849 331 Pfam Lipocalin-like domain 115 275 IPR000566 -
Pslu1g20849 331 PANTHER LIPOCALIN 88 275 IPR002345 GO:0036094(InterPro)
Pslu1g20849 331 SUPERFAMILY Lipocalins 108 279 IPR012674 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g20849 - -