Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pslu1g20900 | ATGGCATCCATGGCTACAACCTTCGCCTCAAAAACCTCCTTCATCGACCGTTCATCCTTCCATGGCGTCCCGATCTCATCGCCGACACGAATCCAATCAATCAAATCAAACCAAAACAAGACCACACCGATCACCATGTCCGCTACACCTTACGATCTCGGATCCTTCACGTTTCAACCCATCAAAGAAGCGATCGTATCGCGTGAGATGACAAGGAGGTACATGACTGATATGATCACGTACGCTGATACTGATGTGGTTGTTGTTGGTGCTGGATCTGCTGGTCTCTCCTGTGCTTATGAACTTAGCAAAAACCCTAACGTTCAGGTAGCTATCATCGAGCAATCTGTGAGCCCTGGTGGTGGAGCATGGCTCGGTGGACAACTATTCTCAGCGATGGTTGTCCGCAAGCCAGCCCACCACTTCCTTGACGAGCTTGAGATCGAGTACGACGAGCAAGAAGACTACGTCGTCATCAAGCACGCGGCTCTGTTCACCTCCACGATCATGAGCAAGCTTTTGGCTAGGCCAAATGTGAAGCTCTTTAATGCGGTTGCAGCTGAGGACTTGATCATCAAGGGTGACAGAGTAGCTGGTGTTGTGACCAACTGGGCTTTGGTCACAATGAACCACGACACACAATCGTGCATGGACCCTAATGTTATGGAGTCTAAGGTGGTTGTGAGCTCATGCGGCCATGATGGTCCCATGGGTGCTACTGGCGTCAAGCGGCTCAGGAGCGTCGGGTTGATCGAGAGCGTTCCTGGGATGAAAGCTCTTGACATGAACGCTGCTGAAGATGCGATTGTTAAGCTGACCAGAGAGATTGTTCCTGGTATGATTGTCACCGGCATGGAAGTTGCTGAGATAGATGGATCTCCAAGAATGGGGCCAACTTTTGGGGCTATGATGATATCTGGGCAGAAGGCGGCTCATTTAGCGTTGAAGGCGTTGGGGCTTCCGAATGCATTGGATGGAACACTTGTGGGAAGCTTGCACCCAGAGCTGATCCTTGCTGCAGCTGATGCTGGTGAGACTGTGGATGCCTAA | 1050 | 51.05 | MASMATTFASKTSFIDRSSFHGVPISSPTRIQSIKSNQNKTTPITMSATPYDLGSFTFQPIKEAIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHHFLDELEIEYDEQEDYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIIKGDRVAGVVTNWALVTMNHDTQSCMDPNVMESKVVVSSCGHDGPMGATGVKRLRSVGLIESVPGMKALDMNAAEDAIVKLTREIVPGMIVTGMEVAEIDGSPRMGPTFGAMMISGQKAAHLALKALGLPNALDGTLVGSLHPELILAAADAGETVDA | 349 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pslu1g20900 | 349 | FunFam | Thiamine thiazole synthase, chloroplastic | 83 | 318 | - | - | |
| Pslu1g20900 | 349 | SUPERFAMILY | FAD-NAD(P)-binding domain | 46 | 311 | IPR036188 | - | |
| Pslu1g20900 | 349 | Hamap | Thiamine thiazole synthase, chloroplastic [THI4]. | 2 | 327 | IPR027495 | GO:0009228(InterPro) | |
| Pslu1g20900 | 349 | PANTHER | THIAMINE THIAZOLE SYNTHASE | 4 | 348 | - | - | |
| Pslu1g20900 | 349 | Pfam | Thi4 family | 67 | 300 | - | - | |
| Pslu1g20900 | 349 | PRINTS | Adrenodoxin reductase family signature | 109 | 122 | - | - | |
| Pslu1g20900 | 349 | PRINTS | Adrenodoxin reductase family signature | 253 | 266 | - | - | |
| Pslu1g20900 | 349 | PRINTS | Adrenodoxin reductase family signature | 85 | 107 | - | - | |
| Pslu1g20900 | 349 | Gene3D | - | 83 | 318 | IPR036188 | - | |
| Pslu1g20900 | 349 | NCBIfam | sulfide-dependent adenosine diphosphate thiazole synthase | 63 | 318 | IPR002922 | - | |
| Pslu1g20900 | 349 | Gene3D | - | 52 | 82 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pslu1g20900 | K03146 | cysteine-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.60] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 134863 | Pslu1g20900 | Pslu2g00619 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 4513947 | Pslu | Pslu1g20900 | Pslu-Chr1:150523687 | Pslu2g00619 | Pslu-Chr2:3982176 |