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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21024 ATGACAACTACAAAGGCTTCAATTTTGATCATTTTGGCCACAATTGCATGCCCCTCAAGTGTCTCAACCCAACCCAGAGCTAGAGTTTGTCGCATCGATTGCTATTCTCCTAAATGCAGAAGGGAATGCAGATACTCTTATAGAGCAAACTGTGGTAGCCCGGGATCAACATGTTACGACCCAAGGTTAATCGGAGGAGATGGCATCGTGTTCTACTTTCACGGCAGGGTTAACGAGCATTTCAGCTTAGTCTCCGACACCAACCTACAAATCAACGGTCGTTTCATCGGCCACAGGCCCGTGGGAAGATCCAGGGACTTCACGTGGATCCAAGCCTTGGGTCTTCTTTCCAACTCCCACTCTTTCTCTCTAGAAGCCACCAAATCCGCCACATGGAACAACGCAACCGATCACCTGAAATTCACCTTCGATAACGAAGAAATCTCCCTACCCATTGGTGGTTTCTACACATGGAAGTCATCAGATGACGAAGTTCCAGTGGAGAGAACTTCTGTTTTTAGGTTTACCGGGCTTTCGGACGACATTGAAGGGGTGTTGGGAAGGACTTATCAGCCTAATTTCAAGAATCCGGCAAAGCCAGGTGTCGCAATGGCGGTTTTTAGAGGTGAAGATAAGTATAAAACAAGTTCGTTGCTTGTGGCTGATTGTGCAAGTTGTATATTTGATTCTTGTAACGTTGTAAAGAGGGAGAATGAGGTGATGGAGAATGGTGGATTGGATTGTTCTGCTAAAGGATTGTTTCATGAAAATGGGATTGTTTGTAAGAAATGA 792 45.33 MTTTKASILIILATIACPSSVSTQPRARVCRIDCYSPKCRRECRYSYRANCGSPGSTCYDPRLIGGDGIVFYFHGRVNEHFSLVSDTNLQINGRFIGHRPVGRSRDFTWIQALGLLSNSHSFSLEATKSATWNNATDHLKFTFDNEEISLPIGGFYTWKSSDDEVPVERTSVFRFTGLSDDIEGVLGRTYQPNFKNPAKPGVAMAVFRGEDKYKTSSLLVADCASCIFDSCNVVKRENEVMENGGLDCSAKGLFHENGIVCKK 263
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21024 263 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Pslu1g21024 263 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 173 263 - -
Pslu1g21024 263 Pfam Root cap 173 228 IPR009646 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21024 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:151333385 Pslu4g07284 Pslu-Chr4:49530634 dispersed