AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21034 ATGGCGGCGATATTATCCTACTTCCGTACGCCCCCAAATAACTTCAGACTGATAAATTATAAATCATCAAACGGAACAACAGCATCATCATCGGTTTCCTTACAGTCAACCTCTCAAATCTCCATACCACCTAATCACCAGCAACAACAACAACAAGAAGATTTTACCCCTTTGTTCGTTCCAGAGGTTGAAAGTGCAGTTGATACATTGTATCCAGAATTCAGGGCGGTTGATAATCTTGTGGCACGTAATACATCTAGAGTTCTTAAAGCATTTCAGAGTGCACGAGTCGGATCTCATCACTTTGGTGGTTGCACTGGCTATGGCCATGAAGAAGCTGGCGGACGAGAAGCCCTTGACCAAGCTTTTGCAGAAATTTTTGGCGCTGAATCTGCAATTGTCCGGTCACAGTTTTTTTCAGGAACTCATGCTATTACCTGTGCACTTTTCGCTTTCTTGAGGCCGGGTGATGAGCTGTTGGCTGTTGCTGGTGCTCCTTATGATACTCTGGAGGAAGTTATAGGAATAAGAGATGGGAATGGATTAGGTTCCCTCAAAGATTTTGGAATCAAGTATCGAGAAGTTGCACTCGCAGATGATGGGGGGCTTGATTGGGATGCTCTTGAAGTTGCTTTAAAACCTCAAACGAAATGTGCCCTTATTCAAAGATCATGTGGCTATTCTTGGCGTAAAAGTTTAAGTGTCAATGAAATATCAAGGGCAATACACATTATCAAGACGCAAAATCCAAATTGTATGGTTATGGTGGATAATTGCTATGGTGAATTCACAGAAGCCCTTGAACCTCCGATGGTGGGGGCAGATCTTATTGCAGGAAGTTTAATTAAAAATCCTGGTGGAACAATTGCACCATGTGGTGGGTACGTTGCAGGGAAAGAAAAATGGGTAAAGGCTGCAGCAGCTCGTCTCTCTGCCCCGGGTCTTGGGGTTGATTGTGGCTCGACTCCTGGTGACATTATGCGGACATTTTTTCAAGGGTTGTACCTCTCACCTCAAATGGTCGGGGAAGCAATAAAGGGTGGCTTATTGATTGCTGAAGTTATGTCCACAAAAGGTTACCGAGTGCAGCCGCTTCCTCGAGCACCACGTCATGACATAGTACAGGCTGTACAACTTGGAAGCCGTGAAAAGCTACTTGCTTTCTGTGAGGCTGTTCAAAGAAGCTCTCCTGTAAGCTCTTATACTAAGCCGATTGCAGGATTAACGGCTGGCTATGCATCAGAGGTGATCTTTGCGGATGGGACATTCATAGATGGTAGCACAAGTGAGCTCTCATGTGATGGACCATTGAGGGAGCCTTTCACTGTCTTCTGTCAGGGTGGCACTCATTGGACGCAGTGGGGACTAGTTCTGGGTGAGGTTCTAAATTCTTTGTAG 1398 45.21 MAAILSYFRTPPNNFRLINYKSSNGTTASSSVSLQSTSQISIPPNHQQQQQQEDFTPLFVPEVESAVDTLYPEFRAVDNLVARNTSRVLKAFQSARVGSHHFGGCTGYGHEEAGGREALDQAFAEIFGAESAIVRSQFFSGTHAITCALFAFLRPGDELLAVAGAPYDTLEEVIGIRDGNGLGSLKDFGIKYREVALADDGGLDWDALEVALKPQTKCALIQRSCGYSWRKSLSVNEISRAIHIIKTQNPNCMVMVDNCYGEFTEALEPPMVGADLIAGSLIKNPGGTIAPCGGYVAGKEKWVKAAAARLSAPGLGVDCGSTPGDIMRTFFQGLYLSPQMVGEAIKGGLLIAEVMSTKGYRVQPLPRAPRHDIVQAVQLGSREKLLAFCEAVQRSSPVSSYTKPIAGLTAGYASEVIFADGTFIDGSTSELSCDGPLREPFTVFCQGGTHWTQWGLVLGEVLNSL 465
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21034 465 SUPERFAMILY PLP-dependent transferases 88 436 IPR015424 -
Pslu1g21034 465 MobiDBLite consensus disorder prediction 28 52 - -
Pslu1g21034 465 Pfam Methionine gamma-lyase 64 463 IPR009651 -
Pslu1g21034 465 Gene3D - 60 110 - -
Pslu1g21034 465 Gene3D - 320 465 - -
Pslu1g21034 465 PANTHER CYS OR MET METABOLISM PYRIDOXAL-PHOSPHATE-DEPENDENT ENZYME 27 465 IPR009651 -
Pslu1g21034 465 Gene3D - 111 319 IPR015421 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21034 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:120746043 Pslu1g21034 Pslu-Chr1:151391295 dispersed