Gene detail

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Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pslu1g21048	ATGGCTAATTTTCTAGCTCAATTTCAGTCTGTAAAAAACTCACGCGATCACATTGTCATTGCCGTTAAAGATGTGGGTGATTTGTGGCCCCTTGTGAAGGAGGGATTTGAGAAACGGCTTCCGTTTAGACGAGTTACATTCAACAACAAATCACGTAATCCTGTAACTGTGGAAAACCTGCCAGCGGAGTTTGTGCTGACAACAGATTCAAGGCTTCTTAGTCGGTTCCCTCAGGAGCAGCTGTCCTTTTGCTTTCAAGAACCATATGCTACTGTGGTTCTTGTCACATGCGAGGACCTTGATGAGTTCAAGACGATTCTAAAACCACGTCTGAAATTAATTATGCAAAATGACGAGGAGTGGTTCATTGTATTTGTGTCCAAAGCTTCACCAGATGATGACCAAGCTAACAAGATGGTGAAAAAAGTTTATGCCAGGCTTGAAGTGGATTTCAACTCAAGGAGGGAAAGATGCTTAAAACTTGATCTTCTCGAGCCAGAAGTAACTTTTTGGGACGATTTTGAAGTCAAAGTCGTGGAGTGCCTCCAAAACACTCTTGATAAGCGCATCCAGTTCTACGAGGACGAGATTCGTAAGCTCACTGAACTACGTTTGATGCCAATTTGGAGTTTTTGTAATCTTTTCATTCTCAAGGAAAGCCTGGCATTCATGTTGGAGATGGCAAATCTTTATGAGGATTCATTGGGGGAATATGATGAACTAGAGCTATGTTACTCAGAATCAGTCAACAAGGTAGGCAAACAGAGGGACTTTGGTGGAATGGACCATGGAGATGATCAAGCTACAATACTAAATCCTGGAAACAAACAACTGACACAAATTGTTCAAGAGAGTTCCTTTAGGGAGTTTGAATTTCGACAGTATTTATTTTCCCGTCAAGCTAAGCTGTTGTTTAATCTACACCGTCCATTTGAGGTTGCATCTAGGGGTTTTTCATTCATAGTTAGCTTCTCAGAAGCAATGGCCATGCACGAGAGTATTTTACCCTTTTGTATGAGGGAAGTTTGGGTCCTAACCGCATGTTTGAGCTTAGTCAAGGCAACTTTTGACCATTACAGAGATAGATTAGTGATACCAGAGATACAAAAAGAATATTATCGTGTAAGGGGGGAATTATATTCTCTATCCCGAGTCAAGTTCATGAGGCTTGCATATTTACTTGGTTATGGACCTGATATAGAAAGAAGTCCAGTCAACAGTGCTTCACTTAGCATGGTGCCTTGGCCCAAGCCAGCAGTTTGGCCGTCAGTTCCCTCTGATGCTTCATCTGAGGTCCCTGTGAAAGAAAAGAAAATTCTTCAAAAGACTCCAAGGATCAAGCATTTTGGTATTCAGAAGAAACAATTGCCCCTTGAACCCTCTTTTCTTCTGCATGAGGCTAATCGTCGAAGACCATCTGTTTCTGCTGGAAATATGTTTGAAGTGTCGGGCATCTCAGGTTCAGAAGCAGAGACATTTTCTTCACTTAAATCACCTTCTTCTTCAATGTTAAGGACAAGTTCTATACCTGTTAACTTTGAGAGCACGATTGAGACCATGAGGCTTGCAGAAGTTTTCGTGGCTGCTGAGCATGCTCTCCATAAAACTATTTCTGATCCGGGTTTATGGAAATCCTTGTCATCTTTAGAGGAGTTTGAGCAAAAATATCTAGAGCTAACAAAGGGTGCTGCTGATAATTATCATCTATCATGGTGGAAAAGGCACGGGGTTGTCCTCGATGGTGAAATTGCAGCTATTTTATGTAAGCATGGTAATTATGATCTTGCTGCTAAATTATATGAAAAAGTTTGCGCTCTTTACTCTGGTGAAGGATGGCAAGATCTATTAGCAGATGTGCTTCCTAATTTAGCTGAATGCCAGAAAATTCTTGATGATCAACCTGGTTACTTAACATCTTGTGTGAGGTTGCTTTCTCTAGATAAAAGTTTGTTTTTGACCAATGAACGCCGAGCTTTTCAGTCAGAAGTAGTGCGTCTTGCACACGGTGAAATGGGGGATCCCGTGCCTTTAGATGTCTCATCCTTAATAACATTTTCTGGAAATTCTGGGCCACCCCTGGAGCTATGTGATGGGGATCCGGGTACATTGTCTGTAAGTTTATGCAGTGAATTTCCCGATGACATCACCCTGGAATCAGTTAGTCTTACCTTAGCAGCTACCAATAATGCAGATGCTCGTGTTAAGGCAATCAGGACCTGTGGCTCTACAATATTGAACACCGGTGGAAATACAATTACCCTTTCCTTGCCCCCACAAAAGCCTGGTTCGTATGTCTTGGGTGTTCTTACAGGGCAGATTGGTCATTTACGATTTAGGTCTCATGGATATTCCAGAGGTGGACCTGCAGACAGTGATGATCTTATGAGTTACGATAAGCCACCTAAGCTCATATTGAAGGTGTTAAAACCTAGGCCTCTTGTCGATCTTACTGCAGCAGTTTCATCTGCATTACTGATGAATGAGCCTCAGTGGGTCGGGATAATTGTAAAGCCTGTTAATTACACTCTCGAGGGTGCTGTTTTGTACATCGACGCTGGCCCAGGGTTGAGGATTGAGGAATCATGTGGCATCGAAATGGAGAAATATACTGATGGTGATACTAATTATGCTTCCGCTGTTTCCAAAGAATTTGCTCAACTTACTCTTAAGAACGGTAGTATAGAATTACCAGAGTGGGCAAGCAGTGTAGATAGTGTTTTGTGGATTCCCGTGTGTGCCATCAAGGATGGGTTAGCAAAAGGAACATCCACAGGGGAAATCTCTTCTCAAAGAACAAGCATCATTGATGGGCTTAGGACATTAGCTCTTAAACTTGAATTTGGAGTGTCACATAATCAGATGTTCAAAAGGACTGTAGCTGTTCATTTTACTGACCCGTTCCATGTTAGCACACATATAGCAGAGCAGGGCAGTGATGGTTCTTCGCTTCTGCAGGTGATACTACATTCACAGGTGAAGGCCTCGTTAACCATCCATGATGCTTGGTTGGATCTAAAAGATGGTTTGGCTCATACTACAAAAGGTGATGGGAGGCCAACGTCTAACTTATTCCCACTTGTGGTTCCTGCAACATCTAGAACTGGAATTTTGTTTAGTATATTGATGGAGCCTACAATCACCGAAGCTGAAGGGAAAGTTGTGCATCCTGATACAATATTAAATATAAAATATGGAATTTCTGGGGATAGAAATTTTGGATCTCATACACCCATGTCTCTAGAAAAAGAAGGCCCCAAGGATGATGTCACACCGTTGTTGAATTTTAGGAGTGTAGTTGTCTTAAAACGGCCCGTGTTGGAACCTTTGTTAGTAGTTGGTTTTGTTCCTCTTCCTCCAAGTGGTCTTAGAGTTGGGCAGCTAATTACAATGAAATGGAGAGTTGAAAGAGTGAAGTTTTTTGAGGAGGAAATACTGTATGAAGTCAATGCGAGTTCAGAGAAATGGATGATTGCTGGTAGGAAACGAGGTCACGCCACTCTCTCCAGTAAGCAAGGTTCAAGAATTGAGATTTCGATATTGTGTGTACCACTTTCTGTTGGATATGTTCGCCCTCCACAACTGGACTTGCAAAACGTGAATAGGGCAAATATTTGCTGCAATCCTGCTGCTCCTCATTTGGTGTGTGTTCTACCTTCACCTTTAAGCTCATCCTTTTGCATTCCAGCATAA	3690	42.06	MANFLAQFQSVKNSRDHIVIAVKDVGDLWPLVKEGFEKRLPFRRVTFNNKSRNPVTVENLPAEFVLTTDSRLLSRFPQEQLSFCFQEPYATVVLVTCEDLDEFKTILKPRLKLIMQNDEEWFIVFVSKASPDDDQANKMVKKVYARLEVDFNSRRERCLKLDLLEPEVTFWDDFEVKVVECLQNTLDKRIQFYEDEIRKLTELRLMPIWSFCNLFILKESLAFMLEMANLYEDSLGEYDELELCYSESVNKVGKQRDFGGMDHGDDQATILNPGNKQLTQIVQESSFREFEFRQYLFSRQAKLLFNLHRPFEVASRGFSFIVSFSEAMAMHESILPFCMREVWVLTACLSLVKATFDHYRDRLVIPEIQKEYYRVRGELYSLSRVKFMRLAYLLGYGPDIERSPVNSASLSMVPWPKPAVWPSVPSDASSEVPVKEKKILQKTPRIKHFGIQKKQLPLEPSFLLHEANRRRPSVSAGNMFEVSGISGSEAETFSSLKSPSSSMLRTSSIPVNFESTIETMRLAEVFVAAEHALHKTISDPGLWKSLSSLEEFEQKYLELTKGAADNYHLSWWKRHGVVLDGEIAAILCKHGNYDLAAKLYEKVCALYSGEGWQDLLADVLPNLAECQKILDDQPGYLTSCVRLLSLDKSLFLTNERRAFQSEVVRLAHGEMGDPVPLDVSSLITFSGNSGPPLELCDGDPGTLSVSLCSEFPDDITLESVSLTLAATNNADARVKAIRTCGSTILNTGGNTITLSLPPQKPGSYVLGVLTGQIGHLRFRSHGYSRGGPADSDDLMSYDKPPKLILKVLKPRPLVDLTAAVSSALLMNEPQWVGIIVKPVNYTLEGAVLYIDAGPGLRIEESCGIEMEKYTDGDTNYASAVSKEFAQLTLKNGSIELPEWASSVDSVLWIPVCAIKDGLAKGTSTGEISSQRTSIIDGLRTLALKLEFGVSHNQMFKRTVAVHFTDPFHVSTHIAEQGSDGSSLLQVILHSQVKASLTIHDAWLDLKDGLAHTTKGDGRPTSNLFPLVVPATSRTGILFSILMEPTITEAEGKVVHPDTILNIKYGISGDRNFGSHTPMSLEKEGPKDDVTPLLNFRSVVVLKRPVLEPLLVVGFVPLPPSGLRVGQLITMKWRVERVKFFEEEILYEVNASSEKWMIAGRKRGHATLSSKQGSRIEISILCVPLSVGYVRPPQLDLQNVNRANICCNPAAPHLVCVLPSPLSSSFCIPA	1229

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pslu1g21048	1229	PANTHER	EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1-TMEM1	9	1228	IPR045126	GO:0006891(PANTHER)\|GO:0034498(PANTHER)\|GO:0048193(InterPro)\|GO:1990071(InterPro)\|GO:1990071(PANTHER)
	Pslu1g21048	1229	Pfam	Trafficking protein particle complex subunit 10, TRAPPC10	1141	1200	IPR022233	-
	Pslu1g21048	1229	Coils	Coil	183	203	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pslu1g21048	K20307	trafficking protein particle complex subunit 10

Event-related genes

Select	Gene_1	Gene_2	Event_name
	134880	Pslu1g21048	Pslu3g16208

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Pslu	Pslu-Chr1:151471312	Pslu3g16208	Pslu-Chr3:116483147	wgd