AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21097 ATGGAAATCATCTCCAGACAACAACAACAGCAACAACAAGATAAAGAAAACCCATCTCCGGCCAACTCTCCGACAAGCAACGGCAGCAGTACCAACAGCAACGGCGCCGGCGCCGTCCAAACACCACCACTAACTCCAAGACCCGTTTCAAGATCCGAACCAAATCCATACCCAACAACTTTTGTCCAAGCTGATACTACTTCATTCAAACAAGTAGTCCAAATGCTAACCGGATCATCCAACGGGAAACCCACCCAACAATCAGATCCGACTCCTTCCAAAATGTCCATTCCGCCGGTCAAAACCGGTCAACAAAAAAAATTCAAACTTTATGAACGCCGGAACAGTTTAAAAAATGGGTTGATGATCAATCCATCGGTTCCAAGATTCGGGTCGGGCCATGGTTTATCACCGAGAATTCAAGAATTACTATCTCCGAGCATTCTTGATTTTCCGTCGCTCGTGTTAAGTCCGGTGACGCCGTTATCACCGTCGATCGGAAGTTCGTCGGAGGAAGAAAGGATAATTGCGGAAAAAGGGTTTTATTTACATCCTTCGCCTAGGGCGGCGACGCCACATGGGACGGCGGAGCCACAGTTGTTACCTCTTTTTCCGGTGACGTCGCCGAGGGTATCGAAATCGTCAATTTAG 651 47.93 MEIISRQQQQQQQDKENPSPANSPTSNGSSTNSNGAGAVQTPPLTPRPVSRSEPNPYPTTFVQADTTSFKQVVQMLTGSSNGKPTQQSDPTPSKMSIPPVKTGQQKKFKLYERRNSLKNGLMINPSVPRFGSGHGLSPRIQELLSPSILDFPSLVLSPVTPLSPSIGSSSEEERIIAEKGFYLHPSPRAATPHGTAEPQLLPLFPVTSPRVSKSSI 216
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21097 216 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 27 212 IPR039611 -
Pslu1g21097 216 MobiDBLite consensus disorder prediction 1 106 - -
Pslu1g21097 216 MobiDBLite consensus disorder prediction 54 100 - -
Pslu1g21097 216 Pfam VQ motif 56 80 IPR008889 -
Pslu1g21097 216 MobiDBLite consensus disorder prediction 1 40 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21097 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
134885 Pslu1g21097 Pslu3g16247
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:151785395 Pslu4g06740 Pslu-Chr4:45215318 dispersed
Pslu Pslu-Chr1:32679030 Pslu1g21097 Pslu-Chr1:151785395 transposed
Pslu Pslu-Chr1:151785395 Pslu3g16247 Pslu-Chr3:116744501 wgd