Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pslu1g21191 | ATGACTTCTTTCCTTGTATTCTTACTCTGTTTTCAAGTTTTTTCATCCATCTCAGAAGCTGTTGTGCCTGCTTCAGACACATTCAAGTACGTAAACGAAGGCGACTTCGGTGACTATATCGTTGAATACGATGCAAATTATCGTGCACTCTCCCCTTTTAACAGCCCATTCCAGCTTTGTTTCTACAACACCACTCCAAATGCATTCACTCTAGCTCTACGTATGGGTACGGTTCGATCAGAATCACTCATGCGTTGGGTTTGGGAAGCTAATCGTGGGAGCCCGGTTCGTGAAAATGCAACCCTCACATTCGGCTCAGACGGGAACCTTGTCCTGGCTGATGCTGACGGTAGGGTTGTCTGGCAAACCAACACCGCCAACAAAGGCGTTGTTGGTTTTCAGGTACTTCCCACTGGCAACATGGTTCTTCACGATGGGAAGGGTAATTTTATATGGCAAAGTTTTGATTCACCAACTGATACTCTTTTGGTTGGTCAATCTCTTCGAGCTGGAGGTGTGAGTAAGCTCGTGAGTCGAGCTTCAACCCAAAACAACATTGATGGAGCGTATAGTTTGGCGATGGAGCCCAAAGGGTTATCTATGTATTACAAGAGTCCTAACTCGCCGCGCGGGTTGTTGTATTGGTCGTCTAGCGAATGGTTCACTATTGACAAGGGTAGTTTGACCAATCTGACTCTTACTTCCGTCCCAGACACCGATGAAGGGTTTCTCTATTACTTGACATTCGATTACTTTGTCACGAACCCATCATCGAATTCAGGTCGAAACATGGCTTATTCAAAGTATAACAACACATTATCGTACCTTCGATTGGGAATCGACGGAAACCTTAAATTCTTTACATATAACCCTAATACACAAGGTGTTGCGTGGGAAAATGTGTACACATTTCTCGATAGGGATTCGATGGAAGGCGAGTGTCAATTACCCGAGCGATGTGGGAAGTTCGGGCTATGTGAAGACAGCCAATGTGTGGCGTGCCCGACCCCTACTGGTCTAAGTGGGTGGAGTAAAGATTGTGATGTAAAGAAGGTGACATCTTGTAAAGCTAGTGACTTTGGGTACTATAAGCTTGAAGGTGTTGATCATTTTATGATCAAGTACACCAGGGGAGATGGGTCAACGAAACAAAGCGATTGCGAGAGCAAATGCACAAAGGATTGCAAGTGCATGGGGTATTTCTATCACACGGATCAATCGAGATGCTGGATTGCTTACGATTTGAAGACGTTAACGAGAGCAGGGAACTCGACTCATTTGGCATATATCAAAACACCCAACAAGTAG | 1308 | 44.95 | MTSFLVFLLCFQVFSSISEAVVPASDTFKYVNEGDFGDYIVEYDANYRALSPFNSPFQLCFYNTTPNAFTLALRMGTVRSESLMRWVWEANRGSPVRENATLTFGSDGNLVLADADGRVVWQTNTANKGVVGFQVLPTGNMVLHDGKGNFIWQSFDSPTDTLLVGQSLRAGGVSKLVSRASTQNNIDGAYSLAMEPKGLSMYYKSPNSPRGLLYWSSSEWFTIDKGSLTNLTLTSVPDTDEGFLYYLTFDYFVTNPSSNSGRNMAYSKYNNTLSYLRLGIDGNLKFFTYNPNTQGVAWENVYTFLDRDSMEGECQLPERCGKFGLCEDSQCVACPTPTGLSGWSKDCDVKKVTSCKASDFGYYKLEGVDHFMIKYTRGDGSTKQSDCESKCTKDCKCMGYFYHTDQSRCWIAYDLKTLTRAGNSTHLAYIKTPNK | 435 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pslu1g21191 | 435 | CDD | PAN-AP-plant | 354 | 433 | - | - | |
| Pslu1g21191 | 435 | Gene3D | - | 26 | 156 | IPR036426 | - | |
| Pslu1g21191 | 435 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 45 | 433 | IPR051343 | - | |
| Pslu1g21191 | 435 | Pfam | D-mannose binding lectin | 87 | 170 | IPR001480 | - | |
| Pslu1g21191 | 435 | PIRSF | SLG | 1 | 435 | IPR035446 | - | |
| Pslu1g21191 | 435 | Pfam | S-locus glycoprotein domain | 226 | 339 | IPR000858 | GO:0048544(InterPro) | |
| Pslu1g21191 | 435 | SMART | blect-4 | 41 | 158 | IPR001480 | - | |
| Pslu1g21191 | 435 | CDD | B-lectin | 41 | 158 | IPR001480 | - | |
| Pslu1g21191 | 435 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 66 | 216 | IPR036426 | - | |
| Pslu1g21191 | 435 | FunFam | Os04g0303100 protein | 77 | 210 | - | - | |
| Pslu1g21191 | 435 | ProSiteProfiles | Bulb-type lectin domain profile. | 25 | 156 | IPR001480 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pslu1g21191 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pslu | Pslu-Chr1:152424262 | Pslu1g21199 | Pslu-Chr1:152459220 | dispersed | |
| Pslu | Pslu-Chr1:152424262 | Pslu1g21194 | Pslu-Chr1:152436440 | proximal |