Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pslu1g21217 | ATGGATTCACTTACTCAATCTGCAGTTACACCAAGCAAAAACCGACTAGGTCGAACGTTTACTAAGGTGTTACCTAGTCGAAAAACAAAGGCGAAACTCGATAAACCAATCATAACCGTTGATCCGACTAAGTTCTTCAACGATCAAGACGAAAAGTTGAAAACCAAAGCGTTTATATCCAAAGTGTTTGCCACCATTTCATCAGTGAAAGCTGCATATGCACAGTTACAATATGCACAATCTCCTTATGATGCTGAAGGGATTCAGTCAGCTGATCAGATCATGGTGTCCGAATTAAAAACGTTATCTGAATTCAAACAGTCGTTCTTGAAGAAACATCTTGATGACAATGCCCCTGAAACCACTCAGCTTTTGGCCGAAATTCAAGAACAAAAGAATATGTTACAAATGTATGAAATAACAACGAAAAAAATGGACAGTCAGAAGAAGCTCAAACATTCAGAGATCATTTTCTTGAAAGAGAAGTTGCAAGAGGCCATTACAGAAAACAAATCGATCGAAAGAAGGTTAAACTCAAGCGGGCCATTATCGTCTCACGAGAAGCTTAATTTATCGTCTCTAAGTATAAACAATTTCCTATTGGCTCTTCAACAATCGACGAAATCGATTACAAGTTTAGTTAAGTTCATGATGAGCGAAATGGAAGCCGCGAATTGGGATTTAAATGCGGCTGCTAGCTCAATCCAACCGGATTTTGCTCATTGGGACAGTGAAAATAATTGTTATGCATTCGAGTCATTCGTTTGTAGGGTGATGTTCGACGGTTTTAACAACTCAAGTTTTTCGATCATGGATAAGTCCGAGTCACCTCAATGCCAACAACGGTTTTTCGACATGTTTATGGAGCTAAAATCTTTAAAAGCAAGAGAATACATCACATGGAAACCAAACTCAATGTTTGCGAAATTTTGTTGGTTAAAGTACTCGAAACTCGTTCACCCGATAATGGAATACTCTCTCTTTGGGAACTTGAATCAACGGAACCTAGTGGCATCCGAAAAATTCCCAGACACTACTTTTTTCGCGTCATTTGCTGACATGGCAAAACGTGTTTGGCTTCTGCATTGTTTAGCATTCGCTTTCGATCCCAACAAGACATCAGTATTTCAAGTCCGAAAAGGGAGTCGGTTTTCGGAAGTGTATATGGAAAGCGTAAATGAGGAAGAAACCCGGAACTCAACGCCACAAGTGGCGTTCACGGTAGTTCCGGGGTTCAGGTTGGGTAAAACAGTGATTCAGTGTCAAGTGTATTTGACATAA | 1281 | 39.81 | MDSLTQSAVTPSKNRLGRTFTKVLPSRKTKAKLDKPIITVDPTKFFNDQDEKLKTKAFISKVFATISSVKAAYAQLQYAQSPYDAEGIQSADQIMVSELKTLSEFKQSFLKKHLDDNAPETTQLLAEIQEQKNMLQMYEITTKKMDSQKKLKHSEIIFLKEKLQEAITENKSIERRLNSSGPLSSHEKLNLSSLSINNFLLALQQSTKSITSLVKFMMSEMEAANWDLNAAASSIQPDFAHWDSENNCYAFESFVCRVMFDGFNNSSFSIMDKSESPQCQQRFFDMFMELKSLKAREYITWKPNSMFAKFCWLKYSKLVHPIMEYSLFGNLNQRNLVASEKFPDTTFFASFADMAKRVWLLHCLAFAFDPNKTSVFQVRKGSRFSEVYMESVNEEETRNSTPQVAFTVVPGFRLGKTVIQCQVYLT | 426 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pslu1g21217 | 426 | Pfam | Plant protein of unknown function (DUF641) | 54 | 176 | IPR006943 | - | |
| Pslu1g21217 | 426 | PANTHER | PROTEIN GRAVITROPIC IN THE LIGHT 1 | 49 | 425 | IPR040225 | GO:0009639(InterPro)|GO:0009959(InterPro) | |
| Pslu1g21217 | 426 | Coils | Coil | 156 | 176 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pslu1g21217 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 134916 | Pslu1g21217 | Pslu3g16338 | |
| 134917 | Pslu1g21217 | Pslu5g15386 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pslu | Pslu-Chr1:146547465 | Pslu1g21217 | Pslu-Chr1:152546677 | dispersed | |
| Pslu | Pslu-Chr1:152546677 | Pslu5g15386 | Pslu-Chr5:112298181 | dispersed | |
| Pslu | Pslu-Chr1:152546677 | Pslu3g16338 | Pslu-Chr3:117171179 | wgd |