AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21217 ATGGATTCACTTACTCAATCTGCAGTTACACCAAGCAAAAACCGACTAGGTCGAACGTTTACTAAGGTGTTACCTAGTCGAAAAACAAAGGCGAAACTCGATAAACCAATCATAACCGTTGATCCGACTAAGTTCTTCAACGATCAAGACGAAAAGTTGAAAACCAAAGCGTTTATATCCAAAGTGTTTGCCACCATTTCATCAGTGAAAGCTGCATATGCACAGTTACAATATGCACAATCTCCTTATGATGCTGAAGGGATTCAGTCAGCTGATCAGATCATGGTGTCCGAATTAAAAACGTTATCTGAATTCAAACAGTCGTTCTTGAAGAAACATCTTGATGACAATGCCCCTGAAACCACTCAGCTTTTGGCCGAAATTCAAGAACAAAAGAATATGTTACAAATGTATGAAATAACAACGAAAAAAATGGACAGTCAGAAGAAGCTCAAACATTCAGAGATCATTTTCTTGAAAGAGAAGTTGCAAGAGGCCATTACAGAAAACAAATCGATCGAAAGAAGGTTAAACTCAAGCGGGCCATTATCGTCTCACGAGAAGCTTAATTTATCGTCTCTAAGTATAAACAATTTCCTATTGGCTCTTCAACAATCGACGAAATCGATTACAAGTTTAGTTAAGTTCATGATGAGCGAAATGGAAGCCGCGAATTGGGATTTAAATGCGGCTGCTAGCTCAATCCAACCGGATTTTGCTCATTGGGACAGTGAAAATAATTGTTATGCATTCGAGTCATTCGTTTGTAGGGTGATGTTCGACGGTTTTAACAACTCAAGTTTTTCGATCATGGATAAGTCCGAGTCACCTCAATGCCAACAACGGTTTTTCGACATGTTTATGGAGCTAAAATCTTTAAAAGCAAGAGAATACATCACATGGAAACCAAACTCAATGTTTGCGAAATTTTGTTGGTTAAAGTACTCGAAACTCGTTCACCCGATAATGGAATACTCTCTCTTTGGGAACTTGAATCAACGGAACCTAGTGGCATCCGAAAAATTCCCAGACACTACTTTTTTCGCGTCATTTGCTGACATGGCAAAACGTGTTTGGCTTCTGCATTGTTTAGCATTCGCTTTCGATCCCAACAAGACATCAGTATTTCAAGTCCGAAAAGGGAGTCGGTTTTCGGAAGTGTATATGGAAAGCGTAAATGAGGAAGAAACCCGGAACTCAACGCCACAAGTGGCGTTCACGGTAGTTCCGGGGTTCAGGTTGGGTAAAACAGTGATTCAGTGTCAAGTGTATTTGACATAA 1281 39.81 MDSLTQSAVTPSKNRLGRTFTKVLPSRKTKAKLDKPIITVDPTKFFNDQDEKLKTKAFISKVFATISSVKAAYAQLQYAQSPYDAEGIQSADQIMVSELKTLSEFKQSFLKKHLDDNAPETTQLLAEIQEQKNMLQMYEITTKKMDSQKKLKHSEIIFLKEKLQEAITENKSIERRLNSSGPLSSHEKLNLSSLSINNFLLALQQSTKSITSLVKFMMSEMEAANWDLNAAASSIQPDFAHWDSENNCYAFESFVCRVMFDGFNNSSFSIMDKSESPQCQQRFFDMFMELKSLKAREYITWKPNSMFAKFCWLKYSKLVHPIMEYSLFGNLNQRNLVASEKFPDTTFFASFADMAKRVWLLHCLAFAFDPNKTSVFQVRKGSRFSEVYMESVNEEETRNSTPQVAFTVVPGFRLGKTVIQCQVYLT 426
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21217 426 Pfam Plant protein of unknown function (DUF641) 54 176 IPR006943 -
Pslu1g21217 426 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 49 425 IPR040225 GO:0009639(InterPro)|GO:0009959(InterPro)
Pslu1g21217 426 Coils Coil 156 176 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21217 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
134916 Pslu1g21217 Pslu3g16338
134917 Pslu1g21217 Pslu5g15386
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:146547465 Pslu1g21217 Pslu-Chr1:152546677 dispersed
Pslu Pslu-Chr1:152546677 Pslu5g15386 Pslu-Chr5:112298181 dispersed
Pslu Pslu-Chr1:152546677 Pslu3g16338 Pslu-Chr3:117171179 wgd