Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pslu1g21232 | ATGAATGCTTCTGTTATTTACCTATTTTTTTCAACTATTATCTCCATTTACATCTTTCAGTTTCAAGCTCAAGCGGCACCTGCAGCTGCTCCGGTGATTAAGCAATTATCTTCCATTCTCAAGTGGACAGCTAGGTCATCTTCTAAATCACCATTATCAGATGGGAATATTCTTCAATTTGAAGATGGTTATTTAGTAGAAACAGTAGTGGAAGGGAATCAGCTAGGTGTTGTGCCTTATTCCATTCGAGTTTCGCAGGAAGGCGAACTTTACGCTGTTGATTCCGTCAATAGCAACATTGTTCGAATTACGCCCCCTTTATCTCAATATAGTCGGGCAAGATTAATTGCGGGGTCCTTCCAGGGTTATACTGGTCATGTTGATGGAAAATCAAATGATGCTCGTTTTGATCATCCTAAAGGTGTTACGATGGATGATAAAGGAAATGTTTATGTTGCTGATACCTCTAATCTCGCCATTAGAAAGATCGGAGAAACAGGTGTGACGACAATTGCTGGAGGAAAATCAAATGTAGCAGGGTATAGGGATGGACCGAGTGAGGATGCACAGTTTTCAAATGATTTTGATGTAATTTATGTGAGGCCAACATGTTCGTTATTAGTTATTGATCGAGGAAATGCTGCTCTTCGACAAATTTCACTAAATCAAGAGGATTGTGATTACCATGACAGCTCTGTCTCTTCCATAGATCTCGTTTTGGTAATTGGTGCCATCTTGATAGGATATGTTGTATGCATGATTCAACAAGGATATGGTTCGTCATATTTCACCAATGTGGAAAAGGTAGAGAGTGATACTAAAAGACCAGGCAAAGAAAAACCCACAAAAACTCAAACTGTGGAGACTGTTAGAGAAGAACAAGAAGCAGGATGGCCATCTTTTGGTCAACTTGTTATGGATCTATCAAAACTCGCCCTCGAAGGCTTCGGTAACATCTTTGTTTCTTTCAACCCGTTCATAAGCTCTAAAAGGGGTCTCACCCCATTAAAAGATCATCTTATAATGCCTGAAGACGAGCCAGCTCATCAGCCTGCATTGGTACAAAAGCACAGAACCCCAACCCCTCTTTCAGAAACCCGTCATGCTCACAATCCAAACGAAAAACACCCGGAAACAAAACCTGCTAAGGTAAGATCATCTAGCTTAAAAGATCCAACCAAGCACAGAGTCCCAAAAAGAGAAGAATATGCAGAGTTTTATGGGGGGGCTAGTGGTGAGGTTCCTCATGTTCGATCCAAGAGCCAAAAAGAAAGACCAAAGCATCGACCCAGAGATAAGCGAGGTGAAGTTGTATATTCAGGCGAACAAAAACCCGTTGACCTAAAACCGGTCAACTATGATGACCCCAAGTTTAGCTATATGAGAAACAAGTATGGAGATTCATATCGTTTCAATTAA | 1419 | 40.87 | MNASVIYLFFSTIISIYIFQFQAQAAPAAAPVIKQLSSILKWTARSSSKSPLSDGNILQFEDGYLVETVVEGNQLGVVPYSIRVSQEGELYAVDSVNSNIVRITPPLSQYSRARLIAGSFQGYTGHVDGKSNDARFDHPKGVTMDDKGNVYVADTSNLAIRKIGETGVTTIAGGKSNVAGYRDGPSEDAQFSNDFDVIYVRPTCSLLVIDRGNAALRQISLNQEDCDYHDSSVSSIDLVLVIGAILIGYVVCMIQQGYGSSYFTNVEKVESDTKRPGKEKPTKTQTVETVREEQEAGWPSFGQLVMDLSKLALEGFGNIFVSFNPFISSKRGLTPLKDHLIMPEDEPAHQPALVQKHRTPTPLSETRHAHNPNEKHPETKPAKVRSSSLKDPTKHRVPKREEYAEFYGGASGEVPHVRSKSQKERPKHRPRDKRGEVVYSGEQKPVDLKPVNYDDPKFSYMRNKYGDSYRFN | 472 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pslu1g21232 | 472 | MobiDBLite | consensus disorder prediction | 271 | 293 | - | - | |
| Pslu1g21232 | 472 | MobiDBLite | consensus disorder prediction | 361 | 403 | - | - | |
| Pslu1g21232 | 472 | SUPERFAMILY | NHL repeat | 72 | 219 | - | - | |
| Pslu1g21232 | 472 | PANTHER | - | 20 | 467 | - | - | |
| Pslu1g21232 | 472 | MobiDBLite | consensus disorder prediction | 347 | 472 | - | - | |
| Pslu1g21232 | 472 | Pfam | NHL repeat | 136 | 162 | IPR001258 | GO:0005515(InterPro) | |
| Pslu1g21232 | 472 | Gene3D | - | 35 | 221 | IPR011042 | - | |
| Pslu1g21232 | 472 | MobiDBLite | consensus disorder prediction | 271 | 290 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pslu1g21232 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pslu | Pslu-Chr1:152619368 | Pslu5g13550 | Pslu-Chr5:99973899 | dispersed | |
| Pslu | Pslu-Chr1:152619368 | Pslu6g04030 | Pslu-Chr6:27287328 | wgd |