Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pslu1g21234 | ATGGCAGATATGGAAACCCTAGGTATACTTGACGAGATTCAAGCACTCGTTTCCGATAAGCTTCAAGTTGTTTCTTACAAGTGGTTGAGTAGAAACTTTTTGGTGCCATCAAATACTGCTAAAAGGTTGCTTCAGGAGTTTGTGGAAAAGAATGGAAGTCGACTGGAAGTTATATATTCTGTATGTGGATGGTTAAAGAATAATCCAGAAGCTTATCATATTAAGCTTGTTTTGAGCTCTAAACTTTCAGAAGCTAAAGAGGAATTTGGTGAGGGTTGTTCGGTTCAAGTTTATAGTGTGCAAGCTTCTGTTCCTAAGGATCCAGCAGTTATTTGGAATGCTGAGTTTATACAGTCAGAACAGCTCTTCAAGGAGCCGTCTAATGTTATTAATTGTTTGCGTGATAATCGGTTTTGTGGGATTTCAAATTCCTTTGTAAAACGCAATTTTGAGGGAACACCTGCGAGCAGTGCAGGTCCAGCACTAAATAATGCTGGAATCAATGGACAACCTTCAAAAACGAGTTTCTCTAATCAAATTTCAGACAAGTCAATCCGTCAAGAAAAGAAGGCTGAACAATCGGACCCTAACCCCAAACCAGCTGTGCATAAAGAGCAAGCTCCTCAGGTGCCTGCTAACAAAAAGAAATCCCAAAATGATAAAAGCTCTTCTGGGACTGCAAGCTCACTGGCTAGCATGTGGGGCCGTGCATCGTCAAAACCAAAGCCCCAGTCCATCTCAGTAAAAGCTGATATCGTTGTTCCTATTTCCAATGATGCTCAGGTACGTGCTAATGAATTGGTAGAGGATGATAGTAGTGACGATGATAATCCGCAAATGAACTTTAAGAGAGGTTCAAACGGTGAAGGAAATAATAGAAAGAGAAGGGTTGTCATGGATTACTCTGATGAAGACAATGAGACTAAAGATGCAGTGAACCTCGCCTCACCAGATCCTCCAAAAAAGCAAGTTGCTCTTGATTCAAAAAAAAGTTCTAGTTTGAATCTGGAAAATAAAAATTTGGATTTTGATGAACAAAAAGTTGAGAAGGTGAAGGGTAAAGAGGAGAAGGTATCCGACATTGATCCTATATCTTTATTAAAAGAAGAAAGACATCCAGCTTTCAACAAGAATGAATATCCTCATAAGGATCATGCTGATCAAAAAGAGAAACCGAGTGATGGTGGTCAAAATGTGCCTAAAAAGAGAAAAGTTGTTAAGACACGAATTGATGAGCGTGGAAGAGAAGTAACTGAGGTGGTTTGGGAGGATGATGAGAAAGAGACAAAGATTAATGACAGTATAAGAAAAGATCAAAGTGACGATAATACTGCAAACAATGCTTTCAATAGGCCCCCTGCAGCAGCTCCCAAGAAGTCACCTGCAGTTGGTAATCCCCCGACGCATGCAACAGTGAAAGCAGGAAACAAGAAAGCCCCTTCCAAGGATCCTAAGCAGGGGAATATTATGTCATTCTTTAAGAAGAAAGTTTAA | 1494 | 40.03 | MADMETLGILDEIQALVSDKLQVVSYKWLSRNFLVPSNTAKRLLQEFVEKNGSRLEVIYSVCGWLKNNPEAYHIKLVLSSKLSEAKEEFGEGCSVQVYSVQASVPKDPAVIWNAEFIQSEQLFKEPSNVINCLRDNRFCGISNSFVKRNFEGTPASSAGPALNNAGINGQPSKTSFSNQISDKSIRQEKKAEQSDPNPKPAVHKEQAPQVPANKKKSQNDKSSSGTASSLASMWGRASSKPKPQSISVKADIVVPISNDAQVRANELVEDDSSDDDNPQMNFKRGSNGEGNNRKRRVVMDYSDEDNETKDAVNLASPDPPKKQVALDSKKSSSLNLENKNLDFDEQKVEKVKGKEEKVSDIDPISLLKEERHPAFNKNEYPHKDHADQKEKPSDGGQNVPKKRKVVKTRIDERGREVTEVVWEDDEKETKINDSIRKDQSDDNTANNAFNRPPAAAPKKSPAVGNPPTHATVKAGNKKAPSKDPKQGNIMSFFKKKV | 497 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pslu1g21234 | 497 | MobiDBLite | consensus disorder prediction | 268 | 497 | - | - | |
| Pslu1g21234 | 497 | MobiDBLite | consensus disorder prediction | 211 | 245 | - | - | |
| Pslu1g21234 | 497 | MobiDBLite | consensus disorder prediction | 155 | 246 | - | - | |
| Pslu1g21234 | 497 | MobiDBLite | consensus disorder prediction | 155 | 182 | - | - | |
| Pslu1g21234 | 497 | FunFam | DNA polymerase delta subunit | 7 | 149 | - | - | |
| Pslu1g21234 | 497 | MobiDBLite | consensus disorder prediction | 288 | 311 | - | - | |
| Pslu1g21234 | 497 | Pfam | DNA polymerase subunit Cdc27 | 23 | 496 | IPR019038 | GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0043625(InterPro) | |
| Pslu1g21234 | 497 | PANTHER | DNA POLYMERASE DELTA SUBUNIT 3 | 1 | 496 | IPR019038 | GO:0003887(PANTHER)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0006271(PANTHER)|GO:0006297(PANTHER)|GO:0043625(PANTHER)|GO:0043625(InterPro)|GO:1904161(PANTHER) | |
| Pslu1g21234 | 497 | MobiDBLite | consensus disorder prediction | 340 | 440 | - | - | |
| Pslu1g21234 | 497 | Gene3D | DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain | 7 | 146 | IPR041913 | - | |
| Pslu1g21234 | 497 | MobiDBLite | consensus disorder prediction | 183 | 199 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pslu1g21234 | K03504 | DNA polymerase delta subunit 3 |