AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21234 ATGGCAGATATGGAAACCCTAGGTATACTTGACGAGATTCAAGCACTCGTTTCCGATAAGCTTCAAGTTGTTTCTTACAAGTGGTTGAGTAGAAACTTTTTGGTGCCATCAAATACTGCTAAAAGGTTGCTTCAGGAGTTTGTGGAAAAGAATGGAAGTCGACTGGAAGTTATATATTCTGTATGTGGATGGTTAAAGAATAATCCAGAAGCTTATCATATTAAGCTTGTTTTGAGCTCTAAACTTTCAGAAGCTAAAGAGGAATTTGGTGAGGGTTGTTCGGTTCAAGTTTATAGTGTGCAAGCTTCTGTTCCTAAGGATCCAGCAGTTATTTGGAATGCTGAGTTTATACAGTCAGAACAGCTCTTCAAGGAGCCGTCTAATGTTATTAATTGTTTGCGTGATAATCGGTTTTGTGGGATTTCAAATTCCTTTGTAAAACGCAATTTTGAGGGAACACCTGCGAGCAGTGCAGGTCCAGCACTAAATAATGCTGGAATCAATGGACAACCTTCAAAAACGAGTTTCTCTAATCAAATTTCAGACAAGTCAATCCGTCAAGAAAAGAAGGCTGAACAATCGGACCCTAACCCCAAACCAGCTGTGCATAAAGAGCAAGCTCCTCAGGTGCCTGCTAACAAAAAGAAATCCCAAAATGATAAAAGCTCTTCTGGGACTGCAAGCTCACTGGCTAGCATGTGGGGCCGTGCATCGTCAAAACCAAAGCCCCAGTCCATCTCAGTAAAAGCTGATATCGTTGTTCCTATTTCCAATGATGCTCAGGTACGTGCTAATGAATTGGTAGAGGATGATAGTAGTGACGATGATAATCCGCAAATGAACTTTAAGAGAGGTTCAAACGGTGAAGGAAATAATAGAAAGAGAAGGGTTGTCATGGATTACTCTGATGAAGACAATGAGACTAAAGATGCAGTGAACCTCGCCTCACCAGATCCTCCAAAAAAGCAAGTTGCTCTTGATTCAAAAAAAAGTTCTAGTTTGAATCTGGAAAATAAAAATTTGGATTTTGATGAACAAAAAGTTGAGAAGGTGAAGGGTAAAGAGGAGAAGGTATCCGACATTGATCCTATATCTTTATTAAAAGAAGAAAGACATCCAGCTTTCAACAAGAATGAATATCCTCATAAGGATCATGCTGATCAAAAAGAGAAACCGAGTGATGGTGGTCAAAATGTGCCTAAAAAGAGAAAAGTTGTTAAGACACGAATTGATGAGCGTGGAAGAGAAGTAACTGAGGTGGTTTGGGAGGATGATGAGAAAGAGACAAAGATTAATGACAGTATAAGAAAAGATCAAAGTGACGATAATACTGCAAACAATGCTTTCAATAGGCCCCCTGCAGCAGCTCCCAAGAAGTCACCTGCAGTTGGTAATCCCCCGACGCATGCAACAGTGAAAGCAGGAAACAAGAAAGCCCCTTCCAAGGATCCTAAGCAGGGGAATATTATGTCATTCTTTAAGAAGAAAGTTTAA 1494 40.03 MADMETLGILDEIQALVSDKLQVVSYKWLSRNFLVPSNTAKRLLQEFVEKNGSRLEVIYSVCGWLKNNPEAYHIKLVLSSKLSEAKEEFGEGCSVQVYSVQASVPKDPAVIWNAEFIQSEQLFKEPSNVINCLRDNRFCGISNSFVKRNFEGTPASSAGPALNNAGINGQPSKTSFSNQISDKSIRQEKKAEQSDPNPKPAVHKEQAPQVPANKKKSQNDKSSSGTASSLASMWGRASSKPKPQSISVKADIVVPISNDAQVRANELVEDDSSDDDNPQMNFKRGSNGEGNNRKRRVVMDYSDEDNETKDAVNLASPDPPKKQVALDSKKSSSLNLENKNLDFDEQKVEKVKGKEEKVSDIDPISLLKEERHPAFNKNEYPHKDHADQKEKPSDGGQNVPKKRKVVKTRIDERGREVTEVVWEDDEKETKINDSIRKDQSDDNTANNAFNRPPAAAPKKSPAVGNPPTHATVKAGNKKAPSKDPKQGNIMSFFKKKV 497
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21234 497 MobiDBLite consensus disorder prediction 268 497 - -
Pslu1g21234 497 MobiDBLite consensus disorder prediction 211 245 - -
Pslu1g21234 497 MobiDBLite consensus disorder prediction 155 246 - -
Pslu1g21234 497 MobiDBLite consensus disorder prediction 155 182 - -
Pslu1g21234 497 FunFam DNA polymerase delta subunit 7 149 - -
Pslu1g21234 497 MobiDBLite consensus disorder prediction 288 311 - -
Pslu1g21234 497 Pfam DNA polymerase subunit Cdc27 23 496 IPR019038 GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0043625(InterPro)
Pslu1g21234 497 PANTHER DNA POLYMERASE DELTA SUBUNIT 3 1 496 IPR019038 GO:0003887(PANTHER)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0006271(PANTHER)|GO:0006297(PANTHER)|GO:0043625(PANTHER)|GO:0043625(InterPro)|GO:1904161(PANTHER)
Pslu1g21234 497 MobiDBLite consensus disorder prediction 340 440 - -
Pslu1g21234 497 Gene3D DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 7 146 IPR041913 -
Pslu1g21234 497 MobiDBLite consensus disorder prediction 183 199 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21234 K03504 DNA polymerase delta subunit 3