AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21256 ATGAGATGCAACGCGTGCTGGCGGGAACTGGAAGGACGGGCGATATCTACCACGTGTGGCCATCTCTTGTGCAATGAGGATGCTGGTAAGATACTTAGCAACGATGCAGCTTGCCCTATTTGTGATCAAGTTCTTTCTAAAAGTCTCATGAAACCTGTGGATATCAACCCAAACGACGAATGGGTAAATATGGCTATGGCTGGAATATCTCCACAGATATTAATGAAGAGTGCATATAGAAGTGTTATGTTCTACATTGGGCAAAAGGAATTAGAAATGCAATTCAAGATGAATAGGATAGTAGCTCAGTGCAGGCAGAAATGTGAGGCAATGCAAGAGAAGTTCACAGAAAAAATGGAGCAGATCCATACTGCATATCAGAAAATGTCCAAAAGGTGCCAGATGATGGAGCAAGAAATTGAGAACTTATCCAAAGATAAGCAAGAGCTCCAAGAAAAGTTCTCCGAGAAATCTAGGCAAAAGCGAAAACTGGATGAGATGTATGACCAATTGAGAAGTGAGTATGAGTCAGTCAAACGGTCAGCCATTCAGCCTGCAAACAACTTCTTTTCAAGGACAGATGCTGATTTGTTTGCCAGTCCAGCCAACATGATGGATAATAGAGATCCTATGAGGAAAGATTGGGCGGTTATGACCCCTGACACTCCAGGACCTCGAGAAGATATATGGCCACAGGCAACAAGACAGAACAGTAGTAATTCTGGGCCATTCAACATCCCCCGTAGCCCACCTACTAAACATTCAGCAGTTCCAGTTGATAACAGAAGACCTACGGGTCGCTCCATGTTCGGAGGTGGTGGTGGGGGTGGAGGTGGAGGTGGTGGCGGAGATGGTGGAGGAGCAGGAAATCCCTCTATGACCCTGAGAAATCTGATATTGTCGCCAATGAAGCGGCCTCAGGTCTCTCGTAGCCGCCCACAGTTGTTCACGTAA 954 45.91 MRCNACWRELEGRAISTTCGHLLCNEDAGKILSNDAACPICDQVLSKSLMKPVDINPNDEWVNMAMAGISPQILMKSAYRSVMFYIGQKELEMQFKMNRIVAQCRQKCEAMQEKFTEKMEQIHTAYQKMSKRCQMMEQEIENLSKDKQELQEKFSEKSRQKRKLDEMYDQLRSEYESVKRSAIQPANNFFSRTDADLFASPANMMDNRDPMRKDWAVMTPDTPGPREDIWPQATRQNSSNSGPFNIPRSPPTKHSAVPVDNRRPTGRSMFGGGGGGGGGGGGGDGGGAGNPSMTLRNLILSPMKRPQVSRSRPQLFT 317
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21256 317 SUPERFAMILY RING-U-box 2 50 - -
Pslu1g21256 317 MobiDBLite consensus disorder prediction 232 248 - -
Pslu1g21256 317 MobiDBLite consensus disorder prediction 232 317 - -
Pslu1g21256 317 FunFam E3 ubiquitin-protein ligase CCNB1IP1 homolog 1 53 - -
Pslu1g21256 317 Coils Coil 126 181 - -
Pslu1g21256 317 Gene3D Zinc-RING finger domain, C3HC4 (zinc finger) 1 53 IPR013083 -
Pslu1g21256 317 Pfam zinc-RING finger domain 2 43 IPR001841 -
Pslu1g21256 317 PANTHER E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOG 1 317 - GO:0051026(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21256 K10639 E3 ubiquitin-protein ligase CCNP1IP1 [EC:2.3.2.27]