AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21407 ATGGGGAATAAGTTGGGTAGAAGAAGACAGTTAGTTGATGAAAAGTATACAAGGCCTCAAGGGTTGTATCAACATAAAGATGTAGATCATAAGAAGCTTAGAAAGCTTATACTTGATTCTAAGCTTGCTCCTTGTTATCCTGGAGATGATGATTGCAGTTGTGATCTTGAAGAATGCCCTATTTGCTTCTTGTATTACCCAAGTCTAAATAGATCAAGATGTTGCACGAAAGGCATTTGTACCGAGTGTTTCCTGCAGATGAAGACACCTAATTCAACACGCCCTACCCAATGTCCGTTTTGTAAAACATTGAATTATGCCGTCGAGTATAGAGGCGTGAAGAGTAAAGAGGAAAAGGGGCAGGAGCAAATTGAAGAACAAAGGGTGATAGAAGCAAAAATAAGAATGAGACAACAAGAAATTCTAGATGAAGAGGAAAGAATGCTAAAAAGGCAAGAGACAAGTTCTTCGAGCAGGATTAATGAACCGAGTGAAGCTGAATATTATTCCAGAGCAGTGATATCTTCTGAAGGTGAGGAAATTGTCTCTGCTCCACATCCGGGTGGTGCAACAGTTAGACATCCTTCACACTCTAGGGAGAACAGAGATGATGAGTTTGACCTTGATCCTGAAAACATAATGCTCATGGAAGCTATCTGGTTATCATTTCAGGAGGATAACAAGCTCCAACACCATAATCCCAACTATGGTGATGCCACTCAATTAGCAAAATACGCAACAGAAGTGCGTGTTCTAGCATCTAGGGCCCCACAAGCTGAATCATCAGCGTCATCGTCATCACCTTCTGGTGGTCTTGCATGCGCCATAGCCGCCCTAGCTGAACGCCAGCAAACGGGAGGAGAATCGTCAACCAATTACAACTACGGTGGACACATATCCACATACAATGTGCATCATCCCGACCATAGCTCAACACGGTTATCACTTGATAGCCATCTACAAATAAATCAAGATGAGATGGCTGAAACTGCTTACGGGTATCATCATAATTCGAGAGCCATAGACGATGACATTGTGCAAGACGATGAGATTAGTTATGGTGGGGGGAATATTGTTCCCGAGAGCTTTGAAGAGCAGATGATGCTAGCCATGGCGGTTTCGCTGGCTGAGGCTCGAGCCAGGACTAATACACCTGAAGTTGCCTGGAATTAG 1173 43.31 MGNKLGRRRQLVDEKYTRPQGLYQHKDVDHKKLRKLILDSKLAPCYPGDDDCSCDLEECPICFLYYPSLNRSRCCTKGICTECFLQMKTPNSTRPTQCPFCKTLNYAVEYRGVKSKEEKGQEQIEEQRVIEAKIRMRQQEILDEEERMLKRQETSSSSRINEPSEAEYYSRAVISSEGEEIVSAPHPGGATVRHPSHSRENRDDEFDLDPENIMLMEAIWLSFQEDNKLQHHNPNYGDATQLAKYATEVRVLASRAPQAESSASSSSPSGGLACAIAALAERQQTGGESSTNYNYGGHISTYNVHHPDHSSTRLSLDSHLQINQDEMAETAYGYHHNSRAIDDDIVQDDEISYGGGNIVPESFEEQMMLAMAVSLAEARARTNTPEVAWN 390
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21407 390 ProSiteProfiles Zinc finger RING-type profile. 59 102 IPR001841 -
Pslu1g21407 390 PANTHER PROTEIN SIP5 1 292 IPR039301 GO:0005737(PANTHER)
Pslu1g21407 390 MobiDBLite consensus disorder prediction 180 205 - -
Pslu1g21407 390 MobiDBLite consensus disorder prediction 147 167 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21407 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
134930 Pslu1g21407 Pslu5g15174
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:153753943 Pslu5g15174 Pslu-Chr5:111009227 wgd