AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21431 ATGAGGGAAGAAGGAATGAGCTCATCAGGGGACCCATTACTTTTCCCCAATTCCCCTCCTCCTACCACTGCTGCCAGTTCTGCTGGGGCTTCATCACCTGCTGTTGCCAACAATGCCGGCAGTACAGATTGGTTGAGTCATGGTCAAGGATCCAAAGCAGGTTCCCTGTCTCGGATTAGTTCACAGCCCATGTGGGTTTCGTTTAGTACAAGTGCATGTGGTTCAGCCCTTGGGTCCTCTCAACCTTCGTGTAGACCATGGGAAAGGGGTGATCTTTTAAGACGATTATCCACATTTAGGCCTGCAAATTGGTTTGGAAAACCTAAGGCTGCTAGTTCTCTTGCTTGTGCTAGGAGAGGCTGGGTGAATGTGGATGTTGATAATATTCAATGCGAGTCTTGTGGTGCGAACCTCAAATATAATGCACCAGAGTCATGGGCTCCCATAGAAGGTGAAAACGGTGAAGAATTTGCTGACCAACTTGATGAAGGGCATAATGTCACCTGCCCTTGGAGAGGAAACAGCTGTGCAGAAAGCTTAGTGCAGTTCCCTCCTACTCCACCATCAGCCCTAGTGGGGGGTTACAAGGACCGTTGTGATGGACTGCTTCAGTTTCCTTATCTACCTGTTGTGGCTGCTTCTGCACTCGACCAGATGAAGGTCTCTAGGGGTCCAGAAATTGACCGCTTTCTGGTTCAGTCACCTGCTTATCTTCCCGATGTTGCATCTGACTTGGAAATATGCATATATTCACGTGCCCAGAAGTTAATCAGTCTTTGTGGATGGGAACCGAGGTGGCTCGCAAATGTTCAAGACTTTGAAGAGCATTCTGCTCAATCGGCTAGAAATGGTGCTTCTTTCAGTCCTATTAAAGATCGTGATCCTAACAAGAAAATATTATCTGGATCATTTAAAAAAGCTCCAAGGGTTCCCATATCTAAATTTGAATCTAGATCACCGTTGTTAGATTGTACTTTGTGTGGCGCCACAGTGAGAATATTGGATTTCATTCATGTTAGTCGTCCTGCTCGTTTTGTTCCTAACAATATTGATGTCCCTGAAACGAGTAAAAAAATGGTACTTACCCGTGGAATCAGCGCGGCTAGCGGGATTAGCGGATGGGTAGCTGATGGCGGCATGGAGAAAGAGCAGGCGGAGGACATTGACGAAGCTGCAACTACTGGTGATGGGAAGTCAGTGTCAAATATCGGGATGGATTTGAATCTTACGATGGGCAGTGGATTTTCTACTGCACATGGTAGCAAGAGACCGATATCTGAACTATACCAAGATGCAAATATAGGACGGGATCTAGTTATCGGGCAGCCAGCTGGCAGTGAGGTTGGTGATCGAGCAGCATCATATGAATCCCGAGGTCCTACTACTTTCAAAAGAAACGTGGATGAAGGTGGTTCCACTGTTGATAGGCCACAAGGGATGATTCACCAAGCAGATAGTGTAGAGGGTGTTGTCATTGACCGTGATGGTGATGAAGTCAATGATAGCAAGATGTCTCCTGGCCCATCTAAACGTGCACGAGAGTCTCATGCCTCTGAAGCCTATGAGCCATCGTCGGGTGCGGGTCCTAGCCAGACCTTGTATTTTGATATTGGTCGGGCTGGTCCTTCCAGCCAAGGTCATGAACAAACCGGAAGAGCTTCCTCTGTTATTGCAATGGATACAATTTGTCATAGTGACGACGATGATTCAATGGAAAGTGTTGAAAATCATCCAGGATTTGTCGATGAGGTTAATTATCCGTCCATGTCAGGAGTCAAGAGCCCTGATGTCAATGACACATCAGATTTGAACGTCAGCATTCAGGCTCAGCAAAGTACGTGCCCTGCAGTTGTTCGAGTCACAGGTGAGATAGGTGTCAGCAGCACCAATGATGAAGAAGTACTGAACACCGATACCACCACGGTTCATGGGCGGGATGGTCCTAGCCTTGCTATTAGTGGTGGTAGTGTTGGAATGGGTGCAAGTCATGAAGCTGAGATTCACGGGTCTGATGCTTTGATTCATAGGACAGAAAGTGTCGTTGGTGACATGGAACCGGTCACTGGTGTGACTGAGAATCAATGTCAAACCGGTGAGTTTGTCCCTGAAGAACTGCAACAAGAATATTCTGGAAGGGCGGATAGTGGATCGAAAATTGTTGGTTCAGTAAAGGCGGAATCTGTTGAGAGCGGTGACAAGACTAGTGACTTGAATCTCTTACCTAATGAGCAAAGTTCGCATCCTTCTCTTTCTTGCAATGCGGTTGTATATTCTGGCCTCGAAGCATCAAAAGATGAGGTGATGCAGGCACGCAACTCATCTCCTAACGATGAATGTGGCTACCCTGCAAATGGAATTGGGCCTCCAAATGGAGAAAGCAATTTTGAAGAACCTGTGGAGTTTGACCCAATTAAGCATCACAATTTTTTCTGCCCTTGGGTGAATGGCAATGTTGCTGCAGCTGGGGTTATTAACGGTAACAATGGTGCCAGTTCAAGTGCTAGTGCTGTAGCTCTTTGTGGATGGCAGCTGACTTTAGATGCTTTAGATGGCTTCCAAGGGCCTGAACAAAATCAAACTGTTGAATCTGAATCAGCTGCTTCTCTCTACAAGGATGATCGTCGAGTTTCTGGTAAAAAACTCATGGCAAGGCACTCTTTTAACAAAAATCGTGGCCAAAATTGA 2685 46.48 MREEGMSSSGDPLLFPNSPPPTTAASSAGASSPAVANNAGSTDWLSHGQGSKAGSLSRISSQPMWVSFSTSACGSALGSSQPSCRPWERGDLLRRLSTFRPANWFGKPKAASSLACARRGWVNVDVDNIQCESCGANLKYNAPESWAPIEGENGEEFADQLDEGHNVTCPWRGNSCAESLVQFPPTPPSALVGGYKDRCDGLLQFPYLPVVAASALDQMKVSRGPEIDRFLVQSPAYLPDVASDLEICIYSRAQKLISLCGWEPRWLANVQDFEEHSAQSARNGASFSPIKDRDPNKKILSGSFKKAPRVPISKFESRSPLLDCTLCGATVRILDFIHVSRPARFVPNNIDVPETSKKMVLTRGISAASGISGWVADGGMEKEQAEDIDEAATTGDGKSVSNIGMDLNLTMGSGFSTAHGSKRPISELYQDANIGRDLVIGQPAGSEVGDRAASYESRGPTTFKRNVDEGGSTVDRPQGMIHQADSVEGVVIDRDGDEVNDSKMSPGPSKRARESHASEAYEPSSGAGPSQTLYFDIGRAGPSSQGHEQTGRASSVIAMDTICHSDDDDSMESVENHPGFVDEVNYPSMSGVKSPDVNDTSDLNVSIQAQQSTCPAVVRVTGEIGVSSTNDEEVLNTDTTTVHGRDGPSLAISGGSVGMGASHEAEIHGSDALIHRTESVVGDMEPVTGVTENQCQTGEFVPEELQQEYSGRADSGSKIVGSVKAESVESGDKTSDLNLLPNEQSSHPSLSCNAVVYSGLEASKDEVMQARNSSPNDECGYPANGIGPPNGESNFEEPVEFDPIKHHNFFCPWVNGNVAAAGVINGNNGASSSASAVALCGWQLTLDALDGFQGPEQNQTVESESAASLYKDDRRVSGKKLMARHSFNKNRGQN 894
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21431 894 MobiDBLite consensus disorder prediction 496 531 - -
Pslu1g21431 894 MobiDBLite consensus disorder prediction 855 874 - -
Pslu1g21431 894 MobiDBLite consensus disorder prediction 449 478 - -
Pslu1g21431 894 Pfam C3HC zinc finger-like 86 205 IPR012935 GO:0008270(InterPro)
Pslu1g21431 894 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 1 892 - GO:0005634(PANTHER)
Pslu1g21431 894 MobiDBLite consensus disorder prediction 1 56 - -
Pslu1g21431 894 MobiDBLite consensus disorder prediction 20 56 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21431 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:153979904 Pslu6g14326 Pslu-Chr6:105953722 dispersed