AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21432 ATGACTGATCACAAAGTAGAAAAGAGTATTGTAGCAACCCCGGATCAAATAGGATCATCAAATAATCAAGAAGATGATGATAACTCATCCAGCATTCGAACGGTGGAGACGTTGTTGAGGTTGTTTCCGGTGGGCCTATGTGTGGCTGCACTTGTTGTCATGATTAAAGATTCTGAGTCTAATGAATATGGATCTTTATCTTACTCAAACATCGCCTCTTTCAGGTTTTTGGTGCATGCTAATGGAATATGTGCGGGTTATTCGTTACTGTCGGCTGCTTTCACGGCTATACCTCGCCCTGTAACCATGCCTCGAGCCTGGACCTTCTTCCTTCTTGATCAGGTTTTAACATATTTGATACTGGCTGCTGGTGCGGTGGCAACTGAGGTCGCGTTTCTGACATACAAAGGTGATGTGGCGGTGACATGGAGTGAGGCTTGTGGGACCTACGGCCACTTCTGCAAACAAGCCACGGCGTCGATCATCGTCACTTTTGTGGTGGTGCTTTGTTACATTTCGCTGTCACTCATCTCGTCGTATAGGCTATTTAGCAAGTATGATGCACCTGTTGGGTATCATAACAAAGGGATTGAGATCGTGGACTATGGGAATTAA 615 45.37 MTDHKVEKSIVATPDQIGSSNNQEDDDNSSSIRTVETLLRLFPVGLCVAALVVMIKDSESNEYGSLSYSNIASFRFLVHANGICAGYSLLSAAFTAIPRPVTMPRAWTFFLLDQVLTYLILAAGAVATEVAFLTYKGDVAVTWSEACGTYGHFCKQATASIIVTFVVVLCYISLSLISSYRLFSKYDAPVGYHNKGIEIVDYGN 204
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21432 204 MobiDBLite consensus disorder prediction 1 29 - -
Pslu1g21432 204 PANTHER CASP-LIKE PROTEIN 4A4 26 184 - -
Pslu1g21432 204 Pfam Casparian strip membrane protein domain 30 170 IPR006702 -
Pslu1g21432 204 MobiDBLite consensus disorder prediction 13 29 - -
Pslu1g21432 204 NCBIfam plant integral membrane protein TIGR01569 39 180 IPR006459 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21432 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:153987503 Pslu2g00584 Pslu-Chr2:3793519 dispersed