AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21459 ATGGCAAAGCAAAAGATCGTCGTGAAAGTGACAATGTGCAGCGAGAAGAAAACTCGCAAGGCTCTCAGGATCGCCGTTAGTCTCTCTGGAGTTGAGTCAGCATCTTTCGTTGGATCAGATAAAGACCAGATAGTTGTGACTGGAGACGGAATTGACTCAGTCGAATTGGCCATATTACTAAGAAAAGGTGTAGGATATACAGAGTTACTTAGTGTCGGTCTCCTGGAGGAAAAGAAACCCGAACCCAAGGAAACAAAGCCCACGATCGTGCCGATACAAATGAATCCTTACCCGTATTGCCACTATCATGGCTATGGATGGCCTTATTGTTTTTGTGACATGTGA 345 44.93 MAKQKIVVKVTMCSEKKTRKALRIAVSLSGVESASFVGSDKDQIVVTGDGIDSVELAILLRKGVGYTELLSVGLLEEKKPEPKETKPTIVPIQMNPYPYCHYHGYGWPYCFCDM 114
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21459 114 Gene3D - 1 78 - -
Pslu1g21459 114 PANTHER OS04G0464100 PROTEIN 4 87 IPR044296 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21459 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:154101620 Pslu3g16013 Pslu-Chr3:115194806 dispersed
Pslu Pslu-Chr1:154101620 Pslu1g21462 Pslu-Chr1:154112169 proximal
Pslu Pslu-Chr1:154098418 Pslu1g21459 Pslu-Chr1:154101620 tandem