AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21469 ATGCACAAAACGGCACAATCGTGGTTCAGTGGAGGTCCGAGCCAGACGAACAGCGATCTAACGCAAAAATCTCCGTCTCTACTTGCTGATTGGAACGCTTACGCATCATCTTCACAATCTCAAGATCTAGATTCTAGCCTCGGGTTCGATATCGAATCTGCTGTTAGAACCGCTAATGATAAGGTTTCCGGTACTTTTAATGTAGTTTCACAGGGAGTTAGGGGCATACCTGGAAATTTGCAGTCTGCTACCAGCAATGTCCCCACGGGAAAATCTCTGGTGACATTTGGTACACTTCTTGCAGTTGGGGTGTTTCTCGTCTTCATTGCGGTCACTGTGTTTCTACCAGTCATGGTGCTTGTGCCTCAGAAGTTTGCAATCTGTTTCACCATTGGCTGTGCCCTCATAATTGCTTCATTTTTTGCTCTCAAAGGATATAGAACTCAGTTTGCACATATGACATCTAAAGAGAGACTTCCTATCACGTTGGGATTTATTGGAAGCATGGTGGGTACCATTTATGTTTCAATGGTACTTCACAGTTACGTTCTTTCTGTGTTCTTCTCTATTTTACAGGTCATCTCGCTGTCATACTATGCAATTTCTTACTTTCCCGGAGGATCGGCTGGCGTGAAATTCTTCACTTCTGCTATTACTTCATCAATTTTGAGGTGCTTTGGGAGGTGA 687 43.81 MHKTAQSWFSGGPSQTNSDLTQKSPSLLADWNAYASSSQSQDLDSSLGFDIESAVRTANDKVSGTFNVVSQGVRGIPGNLQSATSNVPTGKSLVTFGTLLAVGVFLVFIAVTVFLPVMVLVPQKFAICFTIGCALIIASFFALKGYRTQFAHMTSKERLPITLGFIGSMVGTIYVSMVLHSYVLSVFFSILQVISLSYYAISYFPGGSAGVKFFTSAITSSILRCFGR 228
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21469 228 MobiDBLite consensus disorder prediction 1 21 - -
Pslu1g21469 228 PANTHER UNCHARACTERIZED 1 219 IPR011691 GO:0016020(InterPro)|GO:0016192(InterPro)
Pslu1g21469 228 Pfam Got1-Sft2-like family 93 205 IPR007305 GO:0016192(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21469 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:154157470 Pslu5g16004 Pslu-Chr5:116261351 dispersed